gene12231-v1.0-hybrid (Fragaria vesca)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 gene12231-v1.0-hybrid T261498_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna12231.1-v1.0-hybrid MBD 282 365

Links

Other MBD family TFs
Other Fragaria vesca TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.870
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.786
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.771
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.771
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.761
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.757
mgf002635m Mimulus guttatus mgf002635m N 0.757
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.746
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.743
Cla005887 Citrullus lanatus Cla005887 N 0.743
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.743
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.736
29843.m000288 Ricinus communis 29843.m000288 N 0.732
Cucsa.209330 Cucumis sativus Cucsa.209330 N 0.729
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.722
TCM_039691 Theobroma cacao TCM_039691 N 0.722
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.722
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.714
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.708
GSMUA_Achr1G23690_001 Musa acuminata GSMUA_Achr1G23690_001 N 0.702