gene31058-v1.0-hybrid (Fragaria vesca)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 gene31058-v1.0-hybrid T261509_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna31058.1-v1.0-hybrid MBD 38 111

Links

Other MBD family TFs
Other Fragaria vesca TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.918
MDP0000574053 Malus domestica MDP0000574053 N 0.905
MDP0000375866 Malus domestica MDP0000375866 N 0.905
MDP0000152128 Malus domestica MDP0000152128 N 0.905
Pm027560 Prunus mume Pm027560 N 0.904
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.865
PK04144.1 Cannabis sativa PK04144.1 N 0.865
Ca_06682 Cicer arietinum Ca_06682 N 0.863
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.851
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.851
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.849
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.845
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.839
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.838
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.836
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.833
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.828
TCM_038107 Theobroma cacao TCM_038107 N 0.824
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.797
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.795
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.795
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.792
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.784
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.784
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.784
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.784
MTR_0339s0010 Medicago truncatula MTR_0339s0010 N 0.782
MTR_0339s0020 Medicago truncatula MTR_0339s0020 N 0.778
MTR_4g114785 Medicago truncatula MTR_4g114785 N 0.778
MDP0000301302 Malus domestica MDP0000301302 N 0.776
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.770
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.770
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.770
Cla016961 Citrullus lanatus Cla016961 N 0.767
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.767
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.767
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.765
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.763
Pavir.Ca02859 Panicum virgatum Pavir.Ca02859 N 0.761
LPERR12G16300 Leersia perrieri LPERR12G16300 N 0.757
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.757
GRMZM2G022365 Zea mays GRMZM2G022365 N 0.746
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.743
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.743
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.742
Cla012423 Citrullus lanatus Cla012423 N 0.740
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.739
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.736
OMERI12G13490 Oryza meridionalis OMERI12G13490 N 0.732
OGLUM12G20810 Oryza glumaepatula OGLUM12G20810 N 0.732
BGIOSGA035814 Oryza indica BGIOSGA035814 N 0.732
ONIVA02G25900 Oryza nivara ONIVA02G25900 N 0.732
OBART12G19140 Oryza barthii OBART12G19140 N 0.732
OPUNC12G17310 Oryza punctata OPUNC12G17310 N 0.732
OS12G0620400 Oryza sativa OS12G0620400 N 0.732
Pavir.J29994 Panicum virgatum Pavir.J29994 N 0.732
ORUFI12G21360 Oryza rufipogon ORUFI12G21360 N 0.732
ORGLA12G0164400 Oryza glaberrima ORGLA12G0164400 N 0.732
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.730
BRADI4G21540 Brachypodium distachyon BRADI4G21540 N 0.730
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.730
Cla012920 Citrullus lanatus Cla012920 N 0.730
OB12G26010 Oryza brachyantha OB12G26010 N 0.729
Cucsa.295070 Cucumis sativus Cucsa.295070 N 0.726
Ca_19192 Cicer arietinum Ca_19192 N 0.716
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.703
PK24888.1 Cannabis sativa PK24888.1 N 0.703
Bra016665 Brassica rapa Bra016665 N 0.703
Bo8g066360 Brassica oleracea Bo8g066360 N 0.703
29841.m002855 Ricinus communis 29841.m002855 N 0.703
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.703
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.703
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.703
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.703
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.703
MDP0000248422 Malus domestica MDP0000248422 N 0.703