Gorai.011G083900 (Gossypium raimondii)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Gorai.011G083900 T261525_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G083900.1 MBD 4 77
Gorai.011G083900.2 MBD 4 77

Links

Other MBD family TFs
Other Gossypium raimondii TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29841.m002855 Ricinus communis 29841.m002855 N 0.851
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.767
MBD10 Arabidopsis thaliana AT1G15340 N 0.770
MBD11 Arabidopsis thaliana AT3G15790 N 0.781
Bo8g066360 Brassica oleracea Bo8g066360 N 0.784
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.757
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.784
Bra016665 Brassica rapa Bra016665 N 0.784
Bra021136 Brassica rapa Bra021136 N 0.770
Bra027207 Brassica rapa Bra027207 N 0.729
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.784
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.784
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.703
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.703
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.714
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.824
Ca_06682 Cicer arietinum Ca_06682 N 0.712
Ca_19192 Cicer arietinum Ca_19192 N 0.811
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.780
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.703
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.824
Cla012920 Citrullus lanatus Cla012920 N 0.757
Cla015614 Citrullus lanatus Cla015614 N 0.712
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.743
Cucsa.105420 Cucumis sativus Cucsa.105420 N 0.712
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.929
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.770
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.712
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.703
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.740
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.716
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.703
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.703
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.716
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.795
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.781
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.919
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.727
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.739
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.735
Lus10043263.g Linum usitatissimum Lus10043263.g N 0.750
MDP0000152128 Malus domestica MDP0000152128 N 0.703
MDP0000248422 Malus domestica MDP0000248422 N 0.703
MDP0000301302 Malus domestica MDP0000301302 N 0.724
MDP0000375866 Malus domestica MDP0000375866 N 0.703
MDP0000574053 Malus domestica MDP0000574053 N 0.703
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.703
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.822
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.730
PK04144.1 Cannabis sativa PK04144.1 N 0.716
PK24888.1 Cannabis sativa PK24888.1 N 0.784
POPTR_0006s06690 Populus trichocarpa POPTR_0006s06690 N 0.714
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.743
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.781
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.730
TCM_027169 Theobroma cacao TCM_027169 N 0.903
TCM_038107 Theobroma cacao TCM_038107 N 0.716
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.770
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.819