Lus10017146.g (Linum usitatissimum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Lus10017146.g T261539_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10017146 MBD 173 245

Links

Other MBD family TFs
Other Linum usitatissimum TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29843.m000288 Ricinus communis 29843.m000288 N 0.750
AMTR_s00025p00196500 Amborella trichopoda AMTR_s00025p00196500 N 0.708
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.750
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.778
BRADI1G34320 Brachypodium distachyon BRADI1G34320 N 0.736
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.833
Ca_15552 Cicer arietinum Ca_15552 N 0.764
Ca_15553 Cicer arietinum Ca_15553 N 0.736
chr2.CM0373.530.nc Lotus japonicus chr2.CM0373.530.nc N 0.708
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.789
Cla005887 Citrullus lanatus Cla005887 N 0.778
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.750
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.764
GLYMA01G00520 Glycine max GLYMA01G00520 N 0.708
GLYMA07G15620 Glycine max GLYMA07G15620 N 0.722
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.708
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.750
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.944
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.764
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.750
MBD2 Arabidopsis thaliana AT5G35330 N 0.736
MDP0000222923 Malus domestica MDP0000222923 N 0.764
mgf002635m Mimulus guttatus mgf002635m N 0.736
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.722
OB06G34250 Oryza brachyantha OB06G34250 N 0.722
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.764
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.708
Pm008965 Prunus mume Pm008965 N 0.806
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.806
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.764
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.806
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.792
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.708
TCM_039691 Theobroma cacao TCM_039691 N 0.764
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.753