MDP0000248422 (Malus domestica)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 MDP0000248422 T261561_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000248422 MBD 4 77

Links

Other MBD family TFs
Other Malus domestica TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.905
MDP0000462461 Malus domestica MDP0000462461 N 0.845
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.786
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.763
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.757
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.757
Ca_19192 Cicer arietinum Ca_19192 N 0.757
PK04144.1 Cannabis sativa PK04144.1 N 0.757
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.757
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.753
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.743
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.743
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.741
Ca_06682 Cicer arietinum Ca_06682 N 0.740
Cla015614 Citrullus lanatus Cla015614 N 0.740
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.740
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.732
29841.m002855 Ricinus communis 29841.m002855 N 0.730
TCM_038107 Theobroma cacao TCM_038107 N 0.730
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.730
Pm013666 Prunus mume Pm013666 N 0.729
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.727
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.716
MDP0000152128 Malus domestica MDP0000152128 N 0.716
PK24888.1 Cannabis sativa PK24888.1 N 0.716
MDP0000574053 Malus domestica MDP0000574053 N 0.716
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.716
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.716
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.716
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.716
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.716
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.716
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.712
Pm027560 Prunus mume Pm027560 N 0.712
Cucsa.105420 Cucumis sativus Cucsa.105420 N 0.712
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.707
Bra016665 Brassica rapa Bra016665 N 0.703
Bo8g066360 Brassica oleracea Bo8g066360 N 0.703
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.703
Cla012920 Citrullus lanatus Cla012920 N 0.703
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.703
MDP0000375866 Malus domestica MDP0000375866 N 0.703
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.703