MDP0000375866 (Malus domestica)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 MDP0000375866 T261571_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000375866 MBD 28 101

Links

Other MBD family TFs
Other Malus domestica TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000574053 Malus domestica MDP0000574053 N 0.973
MDP0000152128 Malus domestica MDP0000152128 N 0.973
Pm027560 Prunus mume Pm027560 N 0.945
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.919
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.905
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.905
PK04144.1 Cannabis sativa PK04144.1 N 0.865
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.849
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.838
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.838
Ca_06682 Cicer arietinum Ca_06682 N 0.836
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.824
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.824
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.810
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.806
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.797
TCM_038107 Theobroma cacao TCM_038107 N 0.797
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.797
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.795
MTR_0339s0020 Medicago truncatula MTR_0339s0020 N 0.792
MTR_4g114785 Medicago truncatula MTR_4g114785 N 0.792
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.784
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.784
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.784
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.781
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.776
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.770
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.770
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.770
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.770
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.770
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.757
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.757
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.754
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.746
Pavir.Ca02859 Panicum virgatum Pavir.Ca02859 N 0.746
Cla012423 Citrullus lanatus Cla012423 N 0.743
LPERR12G16300 Leersia perrieri LPERR12G16300 N 0.743
Bra016665 Brassica rapa Bra016665 N 0.730
Bo8g066360 Brassica oleracea Bo8g066360 N 0.730
Ca_19192 Cicer arietinum Ca_19192 N 0.730
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.727
Cla016961 Citrullus lanatus Cla016961 N 0.726
GSMUA_Achr7G01310_001 Musa acuminata GSMUA_Achr7G01310_001 N 0.722
OPUNC12G17310 Oryza punctata OPUNC12G17310 N 0.718
OMERI12G13490 Oryza meridionalis OMERI12G13490 N 0.718
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.716
Cla012920 Citrullus lanatus Cla012920 N 0.716
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.716
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.716
GSMUA_Achr2G12870_001 Musa acuminata GSMUA_Achr2G12870_001 N 0.716
29841.m002855 Ricinus communis 29841.m002855 N 0.716
MBD10 Arabidopsis thaliana AT1G15340 N 0.716
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.716
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.716
OB12G26010 Oryza brachyantha OB12G26010 N 0.714
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.703
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.703
Pavir.J29994 Panicum virgatum Pavir.J29994 N 0.703
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.703
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.703
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.703
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.703
Lus10043263.g Linum usitatissimum Lus10043263.g N 0.703
Cucsa.295070 Cucumis sativus Cucsa.295070 N 0.703
MDP0000248422 Malus domestica MDP0000248422 N 0.703