orange1.1g022816m.g (Citrus sinensis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 orange1.1g022816m.g T261583_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g022816m MBD 5 77

Links

Other MBD family TFs
Other Citrus sinensis TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 1.000
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.918
TCM_027169 Theobroma cacao TCM_027169 N 0.836
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.822
29841.m002855 Ricinus communis 29841.m002855 N 0.822
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.822
Cla012920 Citrullus lanatus Cla012920 N 0.808
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.795
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.795
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.781
PK24888.1 Cannabis sativa PK24888.1 N 0.767
Ca_19192 Cicer arietinum Ca_19192 N 0.767
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.767
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.767
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.753
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.753
MDP0000248422 Malus domestica MDP0000248422 N 0.753
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.740
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.726
TCM_038107 Theobroma cacao TCM_038107 N 0.726
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.726
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.726
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.726
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.726
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.726
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.726
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.726
Bo8g066360 Brassica oleracea Bo8g066360 N 0.712
PK04144.1 Cannabis sativa PK04144.1 N 0.712
Bra016665 Brassica rapa Bra016665 N 0.712
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.712
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.712