SapurV1A.0001s2550 (Salix purpurea)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 SapurV1A.0001s2550 T261616_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0001s2550.10.p MBD 172 245
SapurV1A.0001s2550.1.p MBD 172 245
SapurV1A.0001s2550.2.p MBD 172 245
SapurV1A.0001s2550.3.p MBD 172 245
SapurV1A.0001s2550.4.p MBD 172 245
SapurV1A.0001s2550.5.p MBD 172 245
SapurV1A.0001s2550.6.p MBD 172 245
SapurV1A.0001s2550.7.p MBD 172 245
SapurV1A.0001s2550.8.p MBD 172 245
SapurV1A.0001s2550.9.p MBD 172 245

Links

Other MBD family TFs
Other Salix purpurea TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.958
TCM_039691 Theobroma cacao TCM_039691 N 0.917
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.903
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.903
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.901
Gorai.009G001500 Gossypium raimondii Gorai.009G001500 N 0.891
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.875
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.875
Ca_15552 Cicer arietinum Ca_15552 N 0.861
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.859
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.833
Pm008965 Prunus mume Pm008965 N 0.833
mgf002635m Mimulus guttatus mgf002635m N 0.833
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.833
Ca_15553 Cicer arietinum Ca_15553 N 0.833
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.819
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.819
29843.m000288 Ricinus communis 29843.m000288 N 0.817
Cla005887 Citrullus lanatus Cla005887 N 0.806
GLYMA01G00520 Glycine max GLYMA01G00520 N 0.806
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.803
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.803
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.792
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.792
chr2.CM0373.530.nc Lotus japonicus chr2.CM0373.530.nc N 0.792
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.792
GLYMA07G15620 Glycine max GLYMA07G15620 N 0.792
Thhalv10003457m.g Eutrema salsugineum Thhalv10003457m.g N 0.781
MDP0000222923 Malus domestica MDP0000222923 N 0.764
Bra038936 Brassica rapa Bra038936 N 0.764
Bo8g030620 Brassica oleracea Bo8g030620 N 0.764
Bostr.29044s0085 Boechera stricta Bostr.29044s0085 N 0.763
gene12231-v1.0-hybrid Fragaria vesca gene12231-v1.0-hybrid N 0.757
Lus10021593.g Linum usitatissimum Lus10021593.g N 0.750
MBD02 Arabidopsis lyrata scaffold_703403.1 N 0.747
MBD2 Arabidopsis thaliana AT5G35330 N 0.733
BRADI1G34320 Brachypodium distachyon BRADI1G34320 N 0.722
PDK_20s1621301g001 Phoenix dactylifera PDK_20s1621301g001 N 0.717
Cucsa.209330 Cucumis sativus Cucsa.209330 N 0.712
GSMUA_Achr1G23690_001 Musa acuminata GSMUA_Achr1G23690_001 N 0.702