CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10007967m.g
(
Eutrema salsugineum
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
Thhalv10007967m.g
T261635_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10007967m
MBD
4
77
TDELVSIELPAPASWKKLFYPKRAGTPRKTEIVFMAPTGEEISSRKQLEQYLKAHPGNPLISEFEWTTGETPRR
Links
Other
MBD
family TFs
Other
Eutrema salsugineum
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MBD10
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1001305
N
0.986
Bra016665
Brassica rapa
Bra016665
N
0.973
MBD10
Arabidopsis thaliana
AT1G15340
N
0.973
Bo8g066360
Brassica oleracea
Bo8g066360
N
0.973
Cagra.2238s0088
Capsella grandiflora
Cagra.2238s0088
N
0.946
Carubv10009517m.g
Capsella rubella
Carubv10009517m.g
N
0.946
Bostr.7128s0147
Boechera stricta
Bostr.7128s0147
N
0.946
evm.TU.supercontig_10.263
Carica papaya
evm.TU.supercontig_10.263
N
0.833
Bo8g106130
Brassica oleracea
Bo8g106130
N
0.811
VIT_09s0002g06870
Vitis vinifera
VIT_09s0002g06870
N
0.792
Ca_19192
Cicer arietinum
Ca_19192
N
0.784
PK24888.1
Cannabis sativa
PK24888.1
N
0.784
GLYMA15G01040
Glycine max
GLYMA15G01040
N
0.781
Gorai.011G083900
Gossypium raimondii
Gorai.011G083900
N
0.770
MBD11
Arabidopsis lyrata
scaffold_301848.1
N
0.767
Bra026773
Brassica rapa
Bra026773
N
0.764
Cucsa.096390
Cucumis sativus
Cucsa.096390
N
0.757
29841.m002855
Ricinus communis
29841.m002855
N
0.757
GLYMA13G44230
Glycine max
GLYMA13G44230
N
0.753
TCM_027169
Theobroma cacao
TCM_027169
N
0.750
Bo5g020780
Brassica oleracea
Bo5g020780
N
0.750
chr3.CM0142.530.nd
Lotus japonicus
chr3.CM0142.530.nd
N
0.746
Cla012920
Citrullus lanatus
Cla012920
N
0.743
cassava6704.valid.m1
Manihot esculenta
cassava6704.valid.m1
N
0.743
MBD11
Arabidopsis thaliana
AT3G15790
N
0.740
Aquca_020_00103
Aquilegia coerulea
Aquca_020_00103
N
0.740
GLYMA04G23780
Glycine max
GLYMA04G23780
N
0.740
POPTR_0006s06690
Populus trichocarpa
POPTR_0006s06690
N
0.732
PK04144.1
Cannabis sativa
PK04144.1
N
0.730
Bra027207
Brassica rapa
Bra027207
N
0.729
Ca_06682
Cicer arietinum
Ca_06682
N
0.726
Gorai.006G101100
Gossypium raimondii
Gorai.006G101100
N
0.716
GLYMA06G25310
Glycine max
GLYMA06G25310
N
0.716
GLYMA04G23980
Glycine max
GLYMA04G23980
N
0.716
Bostr.28625s0113
Boechera stricta
Bostr.28625s0113
N
0.716
PRUPE_ppa009989mg
Prunus persica
PRUPE_ppa009989mg
N
0.716
GLYMA06G30590
Glycine max
GLYMA06G30590
N
0.716
chr4.CM0234.40.nc
Lotus japonicus
chr4.CM0234.40.nc
N
0.716
Bra021136
Brassica rapa
Bra021136
N
0.716
Solyc06g068140.2
Solanum lycopersicum
Solyc06g068140.2
N
0.712
Ciclev10010753m.g
Citrus clementina
Ciclev10010753m.g
N
0.707
MTR_4g010210
Medicago truncatula
MTR_4g010210
N
0.707
MDP0000301302
Malus domestica
MDP0000301302
N
0.707
MDP0000574053
Malus domestica
MDP0000574053
N
0.703
GLYMA06G30350
Glycine max
GLYMA06G30350
N
0.703
MDP0000152128
Malus domestica
MDP0000152128
N
0.703
MDP0000375866
Malus domestica
MDP0000375866
N
0.703
orange1.1g022412m.g
Citrus sinensis
orange1.1g022412m.g
N
0.703