chr2.CM0373.530.nc (Lotus japonicus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 chr2.CM0373.530.nc T261691_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr2.CM0373.530.nc MBD 172 247

Links

Other MBD family TFs
Other Lotus japonicus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_15552 Cicer arietinum Ca_15552 N 0.861
Ca_15553 Cicer arietinum Ca_15553 N 0.861
cassava11725.valid.m1 Manihot esculenta cassava11725.valid.m1 N 0.806
evm.TU.supercontig_115.32 Carica papaya evm.TU.supercontig_115.32 N 0.806
TCM_039691 Theobroma cacao TCM_039691 N 0.792
POPTR_0006s07730 Populus trichocarpa POPTR_0006s07730 N 0.792
MTR_6g093020 Medicago truncatula MTR_6g093020 N 0.792
SapurV1A.0001s2550 Salix purpurea SapurV1A.0001s2550 N 0.792
MBD02 Vitis vinifera VIT_11s0065g01010 N 0.792
GLYMA07G15620 Glycine max GLYMA07G15620 N 0.778
Eucgr.C00067 Eucalyptus grandis Eucgr.C00067 N 0.778
POPTR_0018s14340 Populus trichocarpa POPTR_0018s14340 N 0.764
GLYMA01G00520 Glycine max GLYMA01G00520 N 0.764
mgf002635m Mimulus guttatus mgf002635m N 0.750
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.750
Cla005887 Citrullus lanatus Cla005887 N 0.750
29843.m000288 Ricinus communis 29843.m000288 N 0.736
orange1.1g019505m.g Citrus sinensis orange1.1g019505m.g N 0.736
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.722
Aquca_018_00160 Aquilegia coerulea Aquca_018_00160 N 0.722
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.722
Lus10017146.g Linum usitatissimum Lus10017146.g N 0.708
PRUPE_ppa008652mg Prunus persica PRUPE_ppa008652mg N 0.708
Pm008965 Prunus mume Pm008965 N 0.708
MTR_3g037440 Medicago truncatula MTR_3g037440 N 0.708