CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIOSGA006186
(
Oryza indica
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
BGIOSGA006186
T262078_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA006186-PA
mTERF
58
105
RSAPLPQLRGSLALLLSHGLSAGDAARVYSAFPSLLTSPPGEHLRFLS
BGIOSGA006186-PA
mTERF
113
267
PLLRAAVVRSPRLLAASVPGTLRPALRFLRRRVALRRRPLPLAAALLLAFSVDRTLLPKVLFLRDATGMPDPAVCAILRRAPAILSYGIETNLTPKLRFLADRMGRDPAVELAEFPHYFAFSLEGRIRPRHEALKERRVQMSLKDMLTISDDEFR
Links
Other
mTERF
family TFs
Other
Oryza indica
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM02G21930
Oryza glumaepatula
OGLUM02G21930
N
0.984
OS02G0577501
Oryza sativa
OS02G0577501
N
0.984
ONIVA02G23950
Oryza nivara
ONIVA02G23950
N
0.984
OMERI02G21290
Oryza meridionalis
OMERI02G21290
N
0.968
ORUFI02G22840
Oryza rufipogon
ORUFI02G22840
N
0.963
Si017736m.g
Setaria italica
Si017736m.g
N
0.869
Pavir.Ab02027
Panicum virgatum
Pavir.Ab02027
N
0.862
Pavir.J30050
Panicum virgatum
Pavir.J30050
N
0.849
MLOC_54785
Hordeum vulgare
MLOC_54785
N
0.818
GRMZM2G312806
Zea mays
GRMZM2G312806
N
0.817
Sb04g023910
Sorghum bicolor
Sb04g023910
N
0.805