CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g098440
(
Brassica oleracea
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
Bo4g098440
T262139_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g098440.1
mTERF
94
218
LALLKNNGFTFEQITRVVKSFPSILIVNPDAVLLPKLLFFRSIGLTSADTAKLISNCPTTLSLSLQNRLIPCYDSLKSILVEKESILKCLRRGYWIFTLDTVKYLAARLSLCRDAGVKDQSIRRL
Bo4g098440.1
mTERF
186
369
GYWIFTLDTVKYLAARLSLCRDAGVKDQSIRRLVQNGPLVFFCSERKFNEVLTRVRSFGFDPKKMYFIHAMLVFFHVSESTVERKFELYQQFGWSRGEFVAAFMRFPNCVKISDEKIKGTMEYLVNNAGLKASAVAMQPFVLGLSLEKRIKPRNMVISDLLSKGFVKKEDLNYFQILKVKECVF
Links
Other
mTERF
family TFs
Other
Brassica oleracea
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra014385
Brassica rapa
Bra014385
N
0.917
Thhalv10006396m.g
Eutrema salsugineum
Thhalv10006396m.g
N
0.865
Carubv10017414m.g
Capsella rubella
Carubv10017414m.g
N
0.838
Cagra.0664s0028
Capsella grandiflora
Cagra.0664s0028
N
0.835
scaffold_503572.1
Arabidopsis lyrata
scaffold_503572.1
N
0.835
Bostr.13158s0292
Boechera stricta
Bostr.13158s0292
N
0.733