CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.2__2219__AT1G79220.1
(
Arabidopsis lyrata
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
fgenesh2_kg.2__2219__AT1G79220.1
T262691_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.2__2219__AT1G79220.1
mTERF
88
165
LQVLRRWGCDDDEISKLFTRRPALQRANVAQLEFKLSLLKPLGITSSDLVKILNCRPRFFSCRIHLVLDERINYFMEI
fgenesh2_kg.2__2219__AT1G79220.1
mTERF
149
363
CRIHLVLDERINYFMEILGSKEVLRRVIIRNPSLMLYDLDDKIKPAIEFYKGLGCSQQDLVTMLISRPTLIPRTNFNKEKFEYIQKTGVTRESKMFKYVAAIIGVSRMETIEEKVRNLEKFGFSEEEIWHLCGKCPILLSLSVEKVQRNMTFVIASMKLPAHSVVKHPCLLLLNLESRLKPRADLVKRVLEMRLKPLIKEVNIFTALRMSEKRFL
Links
Other
mTERF
family TFs
Other
Arabidopsis lyrata
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G79220
Arabidopsis thaliana
AT1G79220
N
0.952
Cagra.1361s0069
Capsella grandiflora
Cagra.1361s0069
N
0.933
Carubv10021712m.g
Capsella rubella
Carubv10021712m.g
N
0.929
Bostr.20129s0357
Boechera stricta
Bostr.20129s0357
N
0.926
Thhalv10019771m.g
Eutrema salsugineum
Thhalv10019771m.g
N
0.837
Bo6g123670
Brassica oleracea
Bo6g123670
N
0.812
Bra035100
Brassica rapa
Bra035100
N
0.806