CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.25542s0005
(
Boechera stricta
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Bostr.25542s0005
T264591_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.25542s0005.1.p
mTERF
10
321
MWFFRNKGFDDPSIDKMLRKCKQLDKAQSDVASENWDYLRNIVGIQERKLPYIVSRCPKVLTLRLDERLIPMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKHPFLMGYSVDKRLRPTTEFLKSSVGLTEDGIQSVVMNFPQLVCRDVNKILKPNYDYLRECGFGDAQIATMVTGYPPILIKSIKNSLQPRIRFLVQVMGRGIDEVASYPEFFHHGLKKKVESRYKLVKGNNIDCSLREMLDCNTKKFH
Links
Other
mTERF
family TFs
Other
Boechera stricta
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
pde191
Arabidopsis lyrata
fgenesh2_kg.7__8__AT4G38160.2
N
0.964
Cagra.1383s0005
Capsella grandiflora
Cagra.1383s0005
N
0.964
pde191
Arabidopsis thaliana
AT4G38160
N
0.951
Thhalv10004546m.g
Eutrema salsugineum
Thhalv10004546m.g
N
0.919
Carubv10007517m.g
Capsella rubella
Carubv10007517m.g
N
0.817
pde191
Populus trichocarpa
POPTR_0009s17140
N
0.739
MDP0000296585
Malus domestica
MDP0000296585
N
0.716
PK01272.1
Cannabis sativa
PK01272.1
N
0.709
Pm020708
Prunus mume
Pm020708
N
0.704
cassava6394.valid.m1
Manihot esculenta
cassava6394.valid.m1
N
0.703
PRUPE_ppa008508mg
Prunus persica
PRUPE_ppa008508mg
N
0.703
SapurV1A.0216s0390
Salix purpurea
SapurV1A.0216s0390
N
0.700