Carubv10003638m.g (Capsella rubella)
mTERF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02536 (mTERF) IPR003690 Carubv10003638m.g T264641_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10003638m mTERF 97 180
Carubv10003638m mTERF 181 489

Links

Other mTERF family TFs
Other Capsella rubella TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.2552s0028 Capsella grandiflora Cagra.2552s0028 N 0.995
Bostr.2983s0143 Boechera stricta Bostr.2983s0143 N 0.979
fgenesh2_kg.6__3397__AT4G02990.1 Arabidopsis lyrata fgenesh2_kg.6__3397__AT4G02990.1 N 0.972
MTERF4 Arabidopsis thaliana AT4G02990 N 0.961
Thhalv10028570m.g Eutrema salsugineum Thhalv10028570m.g N 0.938
Bo9g006180 Brassica oleracea Bo9g006180 N 0.889
Bra036228 Brassica rapa Bra036228 N 0.884
POPTR_0014s13360 Populus trichocarpa POPTR_0014s13360 N 0.794
PRUPE_ppa004198mg Prunus persica PRUPE_ppa004198mg N 0.793
Pm019894 Prunus mume Pm019894 N 0.793
cassava29542.valid.m1 Manihot esculenta cassava29542.valid.m1 N 0.789
Gorai.004G084100 Gossypium raimondii Gorai.004G084100 N 0.786
TCM_004475 Theobroma cacao TCM_004475 N 0.784
VIT_07s0104g00720 Vitis vinifera VIT_07s0104g00720 N 0.775
Lus10014877.g Linum usitatissimum Lus10014877.g N 0.775
SapurV1A.0053s0470 Salix purpurea SapurV1A.0053s0470 N 0.774
PK15839.1 Cannabis sativa PK15839.1 N 0.771
MTR_5g068860 Medicago truncatula MTR_5g068860 N 0.767
Cla005647 Citrullus lanatus Cla005647 N 0.762
29703.m001536 Ricinus communis 29703.m001536 N 0.760
Ciclev10019732m.g Citrus clementina Ciclev10019732m.g N 0.758
Cucsa.033690 Cucumis sativus Cucsa.033690 N 0.758
orange1.1g010066m.g Citrus sinensis orange1.1g010066m.g N 0.758
Ca_25867 Cicer arietinum Ca_25867 N 0.758
GLYMA02G38800 Glycine max GLYMA02G38800 N 0.755
mgf009605m Mimulus guttatus mgf009605m N 0.754
mgf007983m Mimulus guttatus mgf007983m N 0.754
Aquca_026_00063 Aquilegia coerulea Aquca_026_00063 N 0.754
Eucgr.A01358 Eucalyptus grandis Eucgr.A01358 N 0.740
PGSC0003DMG400002856 Solanum tuberosum PGSC0003DMG400002856 N 0.722
Solyc04g005630.2 Solanum lycopersicum Solyc04g005630.2 N 0.720
AMTR_s00025p00060270 Amborella trichopoda AMTR_s00025p00060270 N 0.717