CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10007049m.g
(
Capsella rubella
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Carubv10007049m.g
T264644_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10007049m
mTERF
171
376
DTDSAADTRKLRAVSRVSELDPEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKTQWAKIISRFPAILTYSRQKLTSTVDFLTQTGLTEEQIGKILTRCPNIMSYSVEDKLRPTMEYFRSLNVDIAVLLHRCPQTFGLSIESNLKPVT
Carubv10007049m
mTERF
352
468
DIAVLLHRCPQTFGLSIESNLKPVTEFFLENGYGLDEIGIMISRYGALYTFSLKENLMPKWDYFQTMDYPNSELVKFPQFFGYSLQERIKPRYELVKRSGVRLLLNQVLSLSGVEFE
Links
Other
mTERF
family TFs
Other
Capsella rubella
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1718s0021
Capsella grandiflora
Cagra.1718s0021
N
0.991
Bra036876
Brassica rapa
Bra036876
N
0.934
Bo1g057760
Brassica oleracea
Bo1g057760
N
0.931