CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10013933m.g
(
Citrus clementina
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Ciclev10013933m.g
T264688_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10013933m
mTERF
256
299
GGLDMLGSADASFRYLVESFPRLLLLSAESHVKPVVDFLEIVGV
Ciclev10013933m
mTERF
291
597
VDFLEIVGVPKDCMGNVLLLFPPLIFWNIKAIRTKALAFEEIGAVDNDVGKMLLKYPWILSTSIQENYEEILSVFNEEKVPKLSVDRAIRSWPHLLGCSTSKLKLMLDQLGELGVENKKLGQVIAKSPQLLLRKPQEFRQVVSFLEDVGFDRENVGRILGRCPELFASNIERTLMKKIDFLIGIGISKDHLPRTIKKYPELLVSDVDRTLLPRIKYLMEMGLSKRDIAFMVRRFSPLLGYSIDEVFRPKLAFLLNTMEKSLQDVVAYPRYFSYSLEKKIKPRFWVLKGRNIECSLEEMLGKNDDEFA
Ciclev10013935m
mTERF
59
114
DVQQTLAFFEKIEARRGGLDMLGSADASFRYLVESFPRLLLLSAESHVKPVVDFLE
Ciclev10013935m
mTERF
75
128
GGLDMLGSADASFRYLVESFPRLLLLSAESHVKPVVDFLEIVGVPKDCMGNVLL
Ciclev10013935m
mTERF
110
416
VDFLEIVGVPKDCMGNVLLLFPPLIFWNIKAIRTKALAFEEIGAVDNDVGKMLLKYPWILSTSIQENYEEILSVFNEEKVPKLSVDRAIRSWPHLLGCSTSKLKLMLDQLGELGVENKKLGQVIAKSPQLLLRKPQEFRQVVSFLEDVGFDRENVGRILGRCPELFASNIERTLMKKIDFLIGIGISKDHLPRTIKKYPELLVSDVDRTLLPRIKYLMEMGLSKRDIAFMVRRFSPLLGYSIDEVFRPKLAFLLNTMEKSLQDVVAYPRYFSYSLEKKIKPRFWVLKGRNIECSLEEMLGKNDDEFA
Ciclev10013936m
mTERF
34
88
VQQTLAFFEKIEARRGGLDMLGSADASFRYLVESFPRLLLLSAESHVKPVVDFLE
Ciclev10013936m
mTERF
49
101
GGLDMLGSADASFRYLVESFPRLLLLSAESHVKPVVDFLEIVGVPKDCMGNVL
Ciclev10013936m
mTERF
84
390
VDFLEIVGVPKDCMGNVLLLFPPLIFWNIKAIRTKALAFEEIGAVDNDVGKMLLKYPWILSTSIQENYEEILSVFNEEKVPKLSVDRAIRSWPHLLGCSTSKLKLMLDQLGELGVENKKLGQVIAKSPQLLLRKPQEFRQVVSFLEDVGFDRENVGRILGRCPELFASNIERTLMKKIDFLIGIGISKDHLPRTIKKYPELLVSDVDRTLLPRIKYLMEMGLSKRDIAFMVRRFSPLLGYSIDEVFRPKLAFLLNTMEKSLQDVVAYPRYFSYSLEKKIKPRFWVLKGRNIECSLEEMLGKNDDEFA
Links
Other
mTERF
family TFs
Other
Citrus clementina
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g007270m.g
Citrus sinensis
orange1.1g007270m.g
N
0.945
Pm013114
Prunus mume
Pm013114
N
0.724
VIT_09s0054g01030
Vitis vinifera
VIT_09s0054g01030
N
0.724
Gorai.010G135000
Gossypium raimondii
Gorai.010G135000
N
0.716
evm.TU.supercontig_176.24
Carica papaya
evm.TU.supercontig_176.24
N
0.715