CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_139.30
(
Carica papaya
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
evm.TU.supercontig_139.30
T264758_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_139.30
mTERF
38
189
LLAAKPKSLLQKNPLYVAVNSTVPSQIKEKILCLELMGVDSGKALALNPSLHSASLHSIESIVSFLQSKGIHQKDLPRIVGMCPQILTSNVKTELNPVFSFLSHDLKVPDYMFRKVIKKCPRLLTSSVEDQLKPTLFYLQRLGFKDLDSLAY
evm.model.supercontig_139.30
mTERF
151
300
RKVIKKCPRLLTSSVEDQLKPTLFYLQRLGFKDLDSLAYNDAVLLVSSVEKTLIPKLKFLEGLGFSRKETVGMVLRCPALLTFSVENNFKPKLDYFVREMKGELEELKDFPQYFAFSLEKRIKPRYMEMVQSGLKVSLPLMLKSTRVEFQ
Links
Other
mTERF
family TFs
Other
Carica papaya
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.152130
Cucumis sativus
Cucsa.152130
N
0.771
POPTR_0011s02560
Populus trichocarpa
POPTR_0011s02560
N
0.747
TCM_029419
Theobroma cacao
TCM_029419
N
0.747
Pm010460
Prunus mume
Pm010460
N
0.741
SapurV1A.0242s0210
Salix purpurea
SapurV1A.0242s0210
N
0.734
Cla019852
Citrullus lanatus
Cla019852
N
0.734
VIT_10s0003g04040
Vitis vinifera
VIT_10s0003g04040
N
0.734
Thhalv10016991m.g
Eutrema salsugineum
Thhalv10016991m.g
N
0.732
PRUPE_ppa008991mg
Prunus persica
PRUPE_ppa008991mg
N
0.730
gene30384-v1.0-hybrid
Fragaria vesca
gene30384-v1.0-hybrid
N
0.727
Bo4g039470
Brassica oleracea
Bo4g039470
N
0.727
Gorai.011G047900
Gossypium raimondii
Gorai.011G047900
N
0.727
MDP0000233286
Malus domestica
MDP0000233286
N
0.723
Carubv10023713m.g
Capsella rubella
Carubv10023713m.g
N
0.718
Cagra.3346s0013
Capsella grandiflora
Cagra.3346s0013
N
0.718
Aquca_022_00242
Aquilegia coerulea
Aquca_022_00242
N
0.717
Ciclev10016031m.g
Citrus clementina
Ciclev10016031m.g
N
0.715
AT2G34620
Arabidopsis thaliana
AT2G34620
N
0.714
chr6.CM0037.1460.nc
Lotus japonicus
chr6.CM0037.1460.nc
N
0.711
29599.m000171
Ricinus communis
29599.m000171
N
0.711
orange1.1g035716m.g
Citrus sinensis
orange1.1g035716m.g
N
0.709