CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene25243-v1.0-hybrid
(
Fragaria vesca
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
gene25243-v1.0-hybrid
T264816_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna25243.1-v1.0-hybrid
mTERF
339
543
IRWLKHNSLSFPQIGKLICMSKGDLGSIRRRAEWLKSIHVKGRFIGVALVKGGECFLERSNEELDEIVEYLERNGVRRDWMGTVMSRCPELLSYSLEEVTARVGFYLDMGINLKDFGTMVFDYPRVLGYFSLDEMNQKVNYLKEFGLSTEDVGKLIAFRPQLMGCGIEERWKPLVKYLYYLGITRDGMRRMLTIKPILFCADLEK
mrna25243.1-v1.0-hybrid
mTERF
406
714
VEYLERNGVRRDWMGTVMSRCPELLSYSLEEVTARVGFYLDMGINLKDFGTMVFDYPRVLGYFSLDEMNQKVNYLKEFGLSTEDVGKLIAFRPQLMGCGIEERWKPLVKYLYYLGITRDGMRRMLTIKPILFCADLEKTIVPKVKFFQDIGIRDDAIGKMLVKFPPLLTYSLYKKIRPVVIFLITKAGVSDRDIGKVIALGPELLGCNIVHKLEVNVKYFRSLGIHLSTLGEMIADFPMLLRYNTDVLRPKYSYLRRTMVRPLRDLIEFPRFFSYSLEGRIIPRHKVLLENRINLKLRYMLTSTDAEFD
Links
Other
mTERF
family TFs
Other
Fragaria vesca
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm021755
Prunus mume
Pm021755
N
0.857
30190.m010900
Ricinus communis
30190.m010900
N
0.751