Al_scaffold_0002_1204 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Al_scaffold_0002_1204 T266101_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Al_scaffold_0002_1204 Myb 2 20
Al_scaffold_0002_1204 Myb 26 71

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.3125s0001 Boechera stricta Bostr.3125s0001 N 0.836
MYB114 Arabidopsis thaliana AT1G66380 I 0.836
Pm029438 Prunus mume Pm029438 N 0.800
VIT_02s0033g00460 Vitis vinifera VIT_02s0033g00460 N 0.789
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.784
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N 0.738
WER Arabidopsis thaliana AT5G14750 D 0.735
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.734
MDP0000475808 Malus domestica MDP0000475808 N 0.729
orange1.1g044587m.g Citrus sinensis orange1.1g044587m.g N 0.726
TT2 Arabidopsis thaliana AT5G35550 I 0.726
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.714
BGIOSGA037085 Oryza indica BGIOSGA037085 N 0.712
evm.TU.contig_33658 Carica papaya evm.TU.contig_33658 N 0.712
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.712
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.712
Bo5g131980 Brassica oleracea Bo5g131980 N 0.712
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.711
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.708
PDK_20s1415541g003 Phoenix dactylifera PDK_20s1415541g003 N 0.702
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.699
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.697
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.693
OGLUM12G17720 Oryza glumaepatula OGLUM12G17720 N 0.693
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.693
OBART12G16130 Oryza barthii OBART12G16130 N 0.693
MYB94 Arabidopsis thaliana AT3G47600 D 0.692
Pavir.Ia02093 Panicum virgatum Pavir.Ia02093 N 0.691
Pavir.J19088 Panicum virgatum Pavir.J19088 N 0.689
SapurV1A.0552s0030 Salix purpurea SapurV1A.0552s0030 I 0.689
TCM_013983 Theobroma cacao TCM_013983 I 0.689
Traes_5DS_1EF547639 Triticum aestivum Traes_5DS_1EF547639 N 0.685
Traes_5BS_D1C03C165 Triticum aestivum Traes_5BS_D1C03C165 N 0.685
Traes_5AS_7D519210E Triticum aestivum Traes_5AS_7D519210E N 0.685
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I 0.684
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I 0.684
Pavir.J23620 Panicum virgatum Pavir.J23620 N 0.684
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N 0.683
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.680
PK27824.1 Cannabis sativa PK27824.1 N 0.680
Ciclev10029019m.g Citrus clementina Ciclev10029019m.g N 0.680
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.680
Gorai.008G192900 Gossypium raimondii Gorai.008G192900 I 0.679
mgf026463m Mimulus guttatus mgf026463m N 0.679
Cagra.2519s0060 Capsella grandiflora Cagra.2519s0060 N 0.677
MDP0000153773 Malus domestica MDP0000153773 N 0.677
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.677
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.677
PDK_20s1528141g001 Phoenix dactylifera PDK_20s1528141g001 N 0.676
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.675
gene13970-v1.0-hybrid Fragaria vesca gene13970-v1.0-hybrid N 0.675
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.675
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.675
MYB59 Arabidopsis thaliana AT5G59780 D 0.675
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.675
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.675
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.675
Cagra.1317s0038 Capsella grandiflora Cagra.1317s0038 N 0.675
mgf009707m Mimulus guttatus mgf009707m N 0.673
Eucgr.J02073 Eucalyptus grandis Eucgr.J02073 N 0.672
Pavir.Gb01276 Panicum virgatum Pavir.Gb01276 N 0.672
Cagra.17198s0001 Capsella grandiflora Cagra.17198s0001 N 0.672
MYB86 Arabidopsis thaliana AT5G26660 I 0.671
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.670
GLYMA08G44950 Glycine max GLYMA08G44950 N 0.670
Bostr.26833s0259 Boechera stricta Bostr.26833s0259 N 0.669
TCM_005371 Theobroma cacao TCM_005371 I 0.669
TRIUR3_12300 Triticum urartu TRIUR3_12300 N 0.668
TCM_021433 Theobroma cacao TCM_021433 I 0.667
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.667
Traes_5AS_D9A4C1AB0 Triticum aestivum Traes_5AS_D9A4C1AB0 N 0.667
Bra009910 Brassica rapa Bra009910 N 0.665
Traes_2BL_DAA2104F5 Triticum aestivum Traes_2BL_DAA2104F5 N 0.665
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.665
mgf001247m Mimulus guttatus mgf001247m N 0.664
Pavir.J24653 Panicum virgatum Pavir.J24653 N 0.664
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.664
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.663
MYB27 Arabidopsis thaliana AT3G53200 D 0.662
GRMZM2G032180 Zea mays GRMZM2G032180 N 0.661
mgf021749m Mimulus guttatus mgf021749m N 0.661