AMTR_s00009p00263240 (Amborella trichopoda)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AMTR_s00009p00263240 T266146_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.690 0.732
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.687 0.717
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.687 0.717
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM95170 Myb 47 93
ERM95170 Myb 99 145
ERM95170 Myb 151 194

Links

Other Myb/SANT family TFs
Other Amborella trichopoda TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.717
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.717
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.713
OBART01G08110 Oryza barthii OBART01G08110 I 0.713
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.713
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.713
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I 0.710
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.705
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.705
OB01G18340 Oryza brachyantha OB01G18340 I 0.702
29794.m003447 Ricinus communis 29794.m003447 I 0.702
OB12G16480 Oryza brachyantha OB12G16480 I 0.698
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I 0.698
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.698
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I 0.697
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.696
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I 0.694
Bo7g115810 Brassica oleracea Bo7g115810 I 0.693
PDK_20s1371143g001 Phoenix dactylifera PDK_20s1371143g001 I 0.692
OS12G0238000 Oryza sativa OS12G0238000 I 0.692
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.692
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I 0.692
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.692
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.691
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.691
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.691
Cla022565 Citrullus lanatus Cla022565 I 0.691
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.691
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.691
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.690
TCM_047091 Theobroma cacao TCM_047091 I 0.689
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.689
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.689
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.689
SapurV1A.0446s0220 Salix purpurea SapurV1A.0446s0220 I 0.689
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.689
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.689
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I 0.687
MDP0000295807 Malus domestica MDP0000295807 I 0.687
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I 0.687
PC-MYB1 Arabidopsis thaliana AT4G32730 D 0.687
F775_05724 Aegilops tauschii F775_05724 I 0.686
Traes_1AS_61D017632 Triticum aestivum Traes_1AS_61D017632 I 0.684
Bra034531 Brassica rapa Bra034531 I 0.682
Bo3g171130 Brassica oleracea Bo3g171130 I 0.682
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.681
MDP0000179225 Malus domestica MDP0000179225 I 0.680
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.680
Ca_01884 Cicer arietinum Ca_01884 I 0.680
Cla023357 Citrullus lanatus Cla023357 I 0.680
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.679
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.679
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.679
GSMUA_Achr10G14840_001 Musa acuminata GSMUA_Achr10G14840_001 I 0.678
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.677
Bra008956 Brassica rapa Bra008956 I 0.676
TRIUR3_24658 Triticum urartu TRIUR3_24658 I 0.676
PK22174.1 Cannabis sativa PK22174.1 I 0.676
MYB3R-4 Arabidopsis lyrata fgenesh2_kg.6__1121__AT5G11510.1 I 0.676
Bostr.20055s0087 Boechera stricta Bostr.20055s0087 I 0.676
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.675
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.674
OMERI01G08160 Oryza meridionalis OMERI01G08160 I 0.673
MLOC_10556 Hordeum vulgare MLOC_10556 I 0.670
Ca_14925 Cicer arietinum Ca_14925 I 0.670
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.669
Aquca_001_00435 Aquilegia coerulea Aquca_001_00435 I 0.668
Pm005124 Prunus mume Pm005124 I 0.665
Pavir.J07395 Panicum virgatum Pavir.J07395 I 0.665
GLYMA14G21523 Glycine max GLYMA14G21523 I 0.665
Thhalv10024320m.g Eutrema salsugineum Thhalv10024320m.g I 0.664
Pm018007 Prunus mume Pm018007 I 0.664
Bra037045 Brassica rapa Bra037045 I 0.663
Gorai.001G028200 Gossypium raimondii Gorai.001G028200 I 0.662
Bo3g179620 Brassica oleracea Bo3g179620 I 0.662
Bo3g007070 Brassica oleracea Bo3g007070 I 0.662
Cagra.4093s0003 Capsella grandiflora Cagra.4093s0003 I 0.661
Carubv10004063m.g Capsella rubella Carubv10004063m.g I 0.661