AMTR_s00049p00081480 (Amborella trichopoda)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AMTR_s00049p00081480 T266211_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.717 0.766
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.691 0.766
PK07924.1
M01278_2.00 		Cannabis sativa
NGATHYNNN
NNNRDATCN		 PBM
Lambert et al.(2019)
pTH11431 		0.671 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN13621 Myb 196 246

Links

Other Myb/SANT family TFs
Other Amborella trichopoda TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_021300 Theobroma cacao TCM_021300 I 0.717
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.717
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.717
Ca_02989 Cicer arietinum Ca_02989 I 0.717
Cla022101 Citrullus lanatus Cla022101 I 0.717
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.717
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.717
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.717
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.717
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.717
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.717
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.717
29889.m003245 Ricinus communis 29889.m003245 I 0.717
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.717
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.717
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.717
MDP0000224740 Malus domestica MDP0000224740 I 0.717
MDP0000290818 Malus domestica MDP0000290818 I 0.717
PK26059.1 Cannabis sativa PK26059.1 I 0.717
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.717
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.717
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.717
e_gw1.362.4.1 Physcomitrella patens e_gw1.362.4.1 D 0.717
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.717
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.717
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.717
Cla009424 Citrullus lanatus Cla009424 I 0.717
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.717
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.717
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.717
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.711
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.710
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.710
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.710
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.710
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.710
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.710
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.710
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.710
27647.m000179 Ricinus communis 27647.m000179 I 0.710
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.710
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.710
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.710
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.710
TCM_011067 Theobroma cacao TCM_011067 I 0.710
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.710
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.710
mgf010113m Mimulus guttatus mgf010113m I 0.707
mgf012203m Mimulus guttatus mgf012203m I 0.707
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.706
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.701
SELMODRAFT_418787 Selaginella moellendorffii SELMODRAFT_418787 I 0.699
SELMODRAFT_187683 Selaginella moellendorffii SELMODRAFT_187683 I 0.699
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I 0.696
EuGene.0000130210 Micromonas pusilla EuGene.0000130210 I 0.691
e_gw1.1.649.1 Ostreococcus RCC809 e_gw1.1.649.1 I 0.691
OSTLU_5500 Ostreococcus lucimarinus OSTLU_5500 I 0.691
estExt_fgenesh1_pg.C_Chr_16.00010090 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_16.00010090 D 0.691
estExt_fgenesh2_pg.C_Chr_100175 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_100175 I 0.691
e_gw1.10.288.1 Physcomitrella patens e_gw1.10.288.1 I 0.684
GSMUA_Achr3G14630_001 Musa acuminata GSMUA_Achr3G14630_001 I 0.682
F775_27736 Aegilops tauschii F775_27736 I 0.682
OMERI01G37950 Oryza meridionalis OMERI01G37950 I 0.682
ONIVA01G45980 Oryza nivara ONIVA01G45980 I 0.682
Si000815m.g Setaria italica Si000815m.g I 0.682
OLONG_004141 Oryza longistaminata OLONG_004141 I 0.682
OGLUM01G45120 Oryza glumaepatula OGLUM01G45120 I 0.682
OBART01G40940 Oryza barthii OBART01G40940 I 0.682
BGIOSGA000304 Oryza indica BGIOSGA000304 I 0.682
Sb03g043080 Sorghum bicolor Sb03g043080 I 0.682
OB01G49660 Oryza brachyantha OB01G49660 I 0.682
GSMUA_Achr8G32070_001 Musa acuminata GSMUA_Achr8G32070_001 I 0.682
OPUNC01G39740 Oryza punctata OPUNC01G39740 I 0.682
Pavir.J23046 Panicum virgatum Pavir.J23046 I 0.682
TRAES3BF107400040CFD_g Triticum aestivum TRAES3BF107400040CFD_g I 0.682
Traes_3DL_D82CA7827 Triticum aestivum Traes_3DL_D82CA7827 I 0.682
TRAES3BF094200030CFD_g Triticum aestivum TRAES3BF094200030CFD_g I 0.682
Traes_3B_D9F27151E Triticum aestivum Traes_3B_D9F27151E I 0.682
GSMUA_Achr11G05340_001 Musa acuminata GSMUA_Achr11G05340_001 I 0.682
Traes_3AL_9D2735F60 Triticum aestivum Traes_3AL_9D2735F60 I 0.682
MLOC_23250 Hordeum vulgare MLOC_23250 I 0.682
LPERR01G35510 Leersia perrieri LPERR01G35510 I 0.682
ORUFI01G44260 Oryza rufipogon ORUFI01G44260 I 0.682
ORGLA01G0348700 Oryza glaberrima ORGLA01G0348700 I 0.682
GRMZM2G100318 Zea mays GRMZM2G100318 I 0.682
RR26 Oryza sativa OS01G0904700 I 0.682
GRMZM2G177220 Zea mays GRMZM2G177220 I 0.682
Pavir.Ea03527 Panicum virgatum Pavir.Ea03527 I 0.682
SapurV1A.0739s0030 Salix purpurea SapurV1A.0739s0030 I 0.677
mgf013006m Mimulus guttatus mgf013006m I 0.676
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.673
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.673
SapurV1A.0629s0180 Salix purpurea SapurV1A.0629s0180 I 0.671
LjSGA_022114.1 Lotus japonicus LjSGA_022114.1 I 0.671
PK07924.1 Cannabis sativa PK07924.1 D 0.671
SapurV1A.0152s0010 Salix purpurea SapurV1A.0152s0010 I 0.671
MDP0000320381 Malus domestica MDP0000320381 I 0.671
Gorai.005G173300 Gossypium raimondii Gorai.005G173300 I 0.671
evm.TU.supercontig_86.17 Carica papaya evm.TU.supercontig_86.17 I 0.671
Lus10006446.g Linum usitatissimum Lus10006446.g I 0.671
Lus10011389.g Linum usitatissimum Lus10011389.g I 0.671
GLYMA05G27670 Glycine max GLYMA05G27670 I 0.671
Eucgr.H04693 Eucalyptus grandis Eucgr.H04693 I 0.671
Cucsa.069440 Cucumis sativus Cucsa.069440 I 0.671
GLYMA18G01434 Glycine max GLYMA18G01434 I 0.671
Cla023064 Citrullus lanatus Cla023064 I 0.671
Pm006838 Prunus mume Pm006838 I 0.671
cassava13981.valid.m1 Manihot esculenta cassava13981.valid.m1 I 0.671
ARR11 Vitis vinifera VIT_01s0010g02230 I 0.671
TCM_010701 Theobroma cacao TCM_010701 I 0.671
MTR_8g079940 Medicago truncatula MTR_8g079940 I 0.671
POPTR_0010s06290 Populus trichocarpa POPTR_0010s06290 I 0.671
PRUPE_ppa002679mg Prunus persica PRUPE_ppa002679mg I 0.671
cassava29171.valid.m1 Manihot esculenta cassava29171.valid.m1 I 0.671
29929.m004752 Ricinus communis 29929.m004752 I 0.671
Cucsa.394720 Cucumis sativus Cucsa.394720 I 0.671
GLYMA08G10650 Glycine max GLYMA08G10650 I 0.671
Aquca_056_00105 Aquilegia coerulea Aquca_056_00105 I 0.671
GLYMA11G37480 Glycine max GLYMA11G37480 I 0.671
MTR_3g086100 Medicago truncatula MTR_3g086100 I 0.669
GLYMA09G04470 Glycine max GLYMA09G04470 I 0.668
e_gw1.1.548.1 Coccomyxa subellipsoidea C169 e_gw1.1.548.1 I 0.667
CHLREDRAFT_113139 Chlamydomonas reinhardtii CHLREDRAFT_113139 I 0.666
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.665
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.665
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.665
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.665
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.665
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.665
Cla021325 Citrullus lanatus Cla021325 I 0.665
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.665
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.665
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.665
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.665
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.665
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.665
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.665
PDK_20s1451831g001 Phoenix dactylifera PDK_20s1451831g001 I 0.664
cassava40494.m1 Manihot esculenta cassava40494.m1 I 0.664
e_gw1.16.93.1 Physcomitrella patens e_gw1.16.93.1 I 0.664
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.661