AT1G17520 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT1G17520 T266332_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.876 0.957
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.876 0.957
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.837 0.809
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.750 0.723
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.695 0.745
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.662 0.723
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.662 0.723
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.662 0.723
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.662 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G17520.1 Myb 5 57
AT1G17520.2 Myb 5 57
AT1G17520.3 Myb 5 57
AT1G17520.4 Myb 5 57

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_101953.1 Arabidopsis lyrata scaffold_101953.1 I 0.909
Cagra.0824s0121 Capsella grandiflora Cagra.0824s0121 I 0.898
AT1G72740 Arabidopsis thaliana AT1G72740 D 0.876
Gorai.009G143000 Gossypium raimondii Gorai.009G143000 I 0.868
Bra016598 Brassica rapa Bra016598 I 0.863
Bo8g067280 Brassica oleracea Bo8g067280 I 0.863
Thhalv10008387m.g Eutrema salsugineum Thhalv10008387m.g I 0.858
orange1.1g023740m.g Citrus sinensis orange1.1g023740m.g I 0.858
Carubv10009890m.g Capsella rubella Carubv10009890m.g I 0.858
Ciclev10026245m.g Citrus clementina Ciclev10026245m.g I 0.858
Bo8g104830 Brassica oleracea Bo8g104830 I 0.853
29706.m001328 Ricinus communis 29706.m001328 I 0.850
TCM_029078 Theobroma cacao TCM_029078 I 0.850
evm.TU.supercontig_106.31 Carica papaya evm.TU.supercontig_106.31 I 0.850
cassava34930.m1 Manihot esculenta cassava34930.m1 I 0.850
Bostr.7128s0363 Boechera stricta Bostr.7128s0363 I 0.849
Bra025967 Brassica rapa Bra025967 I 0.845
Bo5g023860 Brassica oleracea Bo5g023860 I 0.845
fgenesh2_kg.2__1540__AT1G72740.1 Arabidopsis lyrata fgenesh2_kg.2__1540__AT1G72740.1 I 0.842
Carubv10020636m.g Capsella rubella Carubv10020636m.g I 0.842
Cagra.1013s0027 Capsella grandiflora Cagra.1013s0027 I 0.842
Pm013309 Prunus mume Pm013309 I 0.841
PRUPE_ppa016498mg Prunus persica PRUPE_ppa016498mg I 0.841
OLONG_008666 Oryza longistaminata OLONG_008666 I 0.837
ONIVA01G32190 Oryza nivara ONIVA01G32190 I 0.837
ORUFI01G31370 Oryza rufipogon ORUFI01G31370 I 0.837
OMERI05G07460 Oryza meridionalis OMERI05G07460 I 0.837
OGLUM01G32190 Oryza glumaepatula OGLUM01G32190 I 0.837
BGIOSGA004300 Oryza indica BGIOSGA004300 I 0.837
OBART01G28260 Oryza barthii OBART01G28260 I 0.837
OS01G0708000 Oryza sativa OS01G0708000 D 0.837
ORGLA01G0233700 Oryza glaberrima ORGLA01G0233700 I 0.837
OPUNC01G28080 Oryza punctata OPUNC01G28080 I 0.837
OB01G37330 Oryza brachyantha OB01G37330 I 0.837
Bra030992 Brassica rapa Bra030992 I 0.825
Bo6g116150 Brassica oleracea Bo6g116150 I 0.815
Bra016037 Brassica rapa Bra016037 I 0.815
GLYMA07G00930 Glycine max GLYMA07G00930 I 0.803
GLYMA08G20270 Glycine max GLYMA08G20270 I 0.803
Bostr.10273s0077 Boechera stricta Bostr.10273s0077 I 0.802
Cla012798 Citrullus lanatus Cla012798 I 0.798
Cucsa.341020 Cucumis sativus Cucsa.341020 I 0.798
Bra030894 Brassica rapa Bra030894 I 0.793
Bo3g184590 Brassica oleracea Bo3g184590 I 0.793
Thhalv10018950m.g Eutrema salsugineum Thhalv10018950m.g I 0.787
orange1.1g024128m.g Citrus sinensis orange1.1g024128m.g I 0.776
Ciclev10009173m.g Citrus clementina Ciclev10009173m.g I 0.776
LjSGA_029815.1 Lotus japonicus LjSGA_029815.1 I 0.775
chr2.LjT13P17.300.nd Lotus japonicus chr2.LjT13P17.300.nd I 0.775
SELMODRAFT_49296 Selaginella moellendorffii SELMODRAFT_49296 I 0.770
SELMODRAFT_49297 Selaginella moellendorffii SELMODRAFT_49297 I 0.770
29912.m005376 Ricinus communis 29912.m005376 I 0.768
evm.TU.supercontig_25.81 Carica papaya evm.TU.supercontig_25.81 I 0.767
chr3.LjT02L14.30.nd Lotus japonicus chr3.LjT02L14.30.nd I 0.767
LjSGA_016825.2 Lotus japonicus LjSGA_016825.2 I 0.767
PGSC0003DMG401025742 Solanum tuberosum PGSC0003DMG401025742 I 0.761
TRB1 Arabidopsis thaliana AT1G49950 D 0.750
Cagra.2826s0004 Capsella grandiflora Cagra.2826s0004 I 0.750
Carubv10009836m.g Capsella rubella Carubv10009836m.g I 0.750
TRB1 Arabidopsis lyrata fgenesh2_kg.1__4077__AT1G49950.2 I 0.750
Thhalv10011686m.g Eutrema salsugineum Thhalv10011686m.g I 0.750
Bra018818 Brassica rapa Bra018818 I 0.750
Bostr.26675s0174 Boechera stricta Bostr.26675s0174 I 0.750
Bo6g018740 Brassica oleracea Bo6g018740 I 0.750
Solyc07g040920.2 Solanum lycopersicum Solyc07g040920.2 I 0.749
TRAES3BF075800120CFD_g Triticum aestivum TRAES3BF075800120CFD_g I 0.748
Pavir.Ea02570 Panicum virgatum Pavir.Ea02570 I 0.748
Si002467m.g Setaria italica Si002467m.g I 0.748
BRADI2G47820 Brachypodium distachyon BRADI2G47820 I 0.748
LPERR01G24270 Leersia perrieri LPERR01G24270 I 0.748
Traes_3AL_12B53AB09 Triticum aestivum Traes_3AL_12B53AB09 I 0.748
Lus10027621.g Linum usitatissimum Lus10027621.g I 0.746
MTR_2g099610 Medicago truncatula MTR_2g099610 I 0.746
Eucgr.J02841 Eucalyptus grandis Eucgr.J02841 I 0.744
TCM_042744 Theobroma cacao TCM_042744 I 0.743
GSMUA_Achr4G09130_001 Musa acuminata GSMUA_Achr4G09130_001 I 0.743
GSMUA_Achr8G24960_001 Musa acuminata GSMUA_Achr8G24960_001 I 0.743
GSMUA_Achr4G08670_001 Musa acuminata GSMUA_Achr4G08670_001 I 0.743
SapurV1A.0108s0150 Salix purpurea SapurV1A.0108s0150 I 0.742
SapurV1A.0087s0150 Salix purpurea SapurV1A.0087s0150 I 0.742
Eucgr.C00865 Eucalyptus grandis Eucgr.C00865 I 0.742
POPTR_0006s14940 Populus trichocarpa POPTR_0006s14940 I 0.742
GSMUA_Achr2G13040_001 Musa acuminata GSMUA_Achr2G13040_001 I 0.740
OSTLU_27049 Ostreococcus lucimarinus OSTLU_27049 I 0.740
Aquca_001_00028 Aquilegia coerulea Aquca_001_00028 I 0.739
gw1.1.287.1 Physcomitrella patens gw1.1.287.1 I 0.736
gw1.176.27.1 Physcomitrella patens gw1.176.27.1 I 0.736
Lus10040111.g Linum usitatissimum Lus10040111.g I 0.735
Lus10030935.g Linum usitatissimum Lus10030935.g I 0.735
Carubv10009763m.g Capsella rubella Carubv10009763m.g I 0.735
Cagra.1262s0035 Capsella grandiflora Cagra.1262s0035 I 0.735
MDP0000265359 Malus domestica MDP0000265359 I 0.734
Pm027209 Prunus mume Pm027209 I 0.734
gene12682-v1.0-hybrid Fragaria vesca gene12682-v1.0-hybrid I 0.734
PRUPE_ppa007796mg Prunus persica PRUPE_ppa007796mg I 0.734
mgf007122m Mimulus guttatus mgf007122m I 0.733
PK00568.1 Cannabis sativa PK00568.1 I 0.731
GRMZM2G108424 Zea mays GRMZM2G108424 I 0.730
Pavir.Eb02802 Panicum virgatum Pavir.Eb02802 I 0.730
Sb03g032530 Sorghum bicolor Sb03g032530 I 0.730
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I 0.728
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I 0.728
Ca_02722 Cicer arietinum Ca_02722 I 0.725
VIT_11s0016g01890 Vitis vinifera VIT_11s0016g01890 I 0.723
cassava43824.valid.m1 Manihot esculenta cassava43824.valid.m1 I 0.723
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I 0.722
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I 0.722
GLYMA09G03390 Glycine max GLYMA09G03390 I 0.722
GLYMA15G14320 Glycine max GLYMA15G14320 I 0.722
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I 0.722
POPTR_0018s07040 Populus trichocarpa POPTR_0018s07040 I 0.720
BRADI2G42240 Brachypodium distachyon BRADI2G42240 I 0.715
Si002403m.g Setaria italica Si002403m.g I 0.715
Pavir.Ea02064 Panicum virgatum Pavir.Ea02064 I 0.715
gene07496-v1.0-hybrid Fragaria vesca gene07496-v1.0-hybrid I 0.715
Pavir.J27218 Panicum virgatum Pavir.J27218 I 0.715
Bra039650 Brassica rapa Bra039650 I 0.710
AMTR_s00007p00193000 Amborella trichopoda AMTR_s00007p00193000 I 0.710
Bo5g077530 Brassica oleracea Bo5g077530 I 0.710
mgf009594m Mimulus guttatus mgf009594m I 0.710
PDK_20s1888511g002 Phoenix dactylifera PDK_20s1888511g002 I 0.709
Pm021139 Prunus mume Pm021139 I 0.706
Gorai.003G030800 Gossypium raimondii Gorai.003G030800 I 0.706
Ciclev10026089m.g Citrus clementina Ciclev10026089m.g I 0.706
orange1.1g020653m.g Citrus sinensis orange1.1g020653m.g I 0.706
TCM_000807 Theobroma cacao TCM_000807 I 0.706
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I 0.706
Gorai.007G224200 Gossypium raimondii Gorai.007G224200 I 0.706
TRIUR3_08672 Triticum urartu TRIUR3_08672 I 0.705
Traes_3AL_CF481F6AC Triticum aestivum Traes_3AL_CF481F6AC I 0.705
TRAES3BF118300070CFD_g Triticum aestivum TRAES3BF118300070CFD_g I 0.705
Sb03g026470 Sorghum bicolor Sb03g026470 I 0.705
GRMZM2G087817 Zea mays GRMZM2G087817 I 0.705
GRMZM2G136887 Zea mays GRMZM2G136887 I 0.705
mgf011386m Mimulus guttatus mgf011386m I 0.704
OMERI01G19510 Oryza meridionalis OMERI01G19510 I 0.699
OS01G0589300 Oryza sativa OS01G0589300 I 0.699
ORUFI01G23880 Oryza rufipogon ORUFI01G23880 I 0.699
OMERI01G19490 Oryza meridionalis OMERI01G19490 I 0.699
OBART01G21150 Oryza barthii OBART01G21150 I 0.699
OLONG_011068 Oryza longistaminata OLONG_011068 I 0.699
ONIVA01G23780 Oryza nivara ONIVA01G23780 I 0.699
OPUNC01G21220 Oryza punctata OPUNC01G21220 I 0.699
LPERR01G18090 Leersia perrieri LPERR01G18090 I 0.699
BGIOSGA003871 Oryza indica BGIOSGA003871 I 0.699
ORGLA01G0168300 Oryza glaberrima ORGLA01G0168300 I 0.699
EuGene.1300010252 Ostreococcus RCC809 EuGene.1300010252 I 0.698
Thhalv10012087m.g Eutrema salsugineum Thhalv10012087m.g I 0.698
Gorai.001G013000 Gossypium raimondii Gorai.001G013000 I 0.697
TCM_037620 Theobroma cacao TCM_037620 I 0.697
29661.m000926 Ricinus communis 29661.m000926 I 0.695
MDP0000239354 Malus domestica MDP0000239354 I 0.695
29812.m000204 Ricinus communis 29812.m000204 I 0.695
Lus10033775.g Linum usitatissimum Lus10033775.g I 0.695
Lus10014653.g Linum usitatissimum Lus10014653.g I 0.695
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I 0.695
Cucsa.103240 Cucumis sativus Cucsa.103240 I 0.695
GLYMA05G22500 Glycine max GLYMA05G22500 I 0.695
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I 0.695
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I 0.695
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I 0.695
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I 0.695
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I 0.695
PK06103.1 Cannabis sativa PK06103.1 D 0.695
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I 0.695
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I 0.695
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I 0.695
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I 0.695
GLYMA11G05070 Glycine max GLYMA11G05070 I 0.695
GLYMA01G40220 Glycine max GLYMA01G40220 I 0.695
Pm002374 Prunus mume Pm002374 I 0.695
MTR_4g097130 Medicago truncatula MTR_4g097130 I 0.695
Cla014248 Citrullus lanatus Cla014248 I 0.695
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I 0.695
Ca_09355 Cicer arietinum Ca_09355 I 0.695
Ca_02232 Cicer arietinum Ca_02232 I 0.695
GLYMA17G17370 Glycine max GLYMA17G17370 I 0.695
MTR_8g018410 Medicago truncatula MTR_8g018410 I 0.694
Solyc01g106940.2 Solanum lycopersicum Solyc01g106940.2 I 0.691
EuGene.0000030935 Micromonas pusilla EuGene.0000030935 I 0.690
GRMZM2G023667 Zea mays GRMZM2G023667 I 0.690
Ca_08043 Cicer arietinum Ca_08043 I 0.688
MTR_2g031870 Medicago truncatula MTR_2g031870 I 0.688
SELMODRAFT_443975 Selaginella moellendorffii SELMODRAFT_443975 I 0.686
SELMODRAFT_49312 Selaginella moellendorffii SELMODRAFT_49312 I 0.686
Eucgr.H02312 Eucalyptus grandis Eucgr.H02312 I 0.685
Ca_10058 Cicer arietinum Ca_10058 I 0.683
MTR_8g092810 Medicago truncatula MTR_8g092810 I 0.680
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I 0.679
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I 0.679
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I 0.678
MDP0000234807 Malus domestica MDP0000234807 I 0.678
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I 0.673
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I 0.673
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I 0.673
MLOC_10278 Hordeum vulgare MLOC_10278 I 0.673
TRIUR3_10613 Triticum urartu TRIUR3_10613 I 0.673
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I 0.673
Bra029978 Brassica rapa Bra029978 I 0.672
Bo1g081300 Brassica oleracea Bo1g081300 I 0.672
Carubv10026874m.g Capsella rubella Carubv10026874m.g I 0.672
TRB3 Arabidopsis lyrata fgenesh2_kg.5__1337__AT3G49850.1 I 0.672
Cagra.0342s0046 Capsella grandiflora Cagra.0342s0046 I 0.672
Bostr.6864s0256 Boechera stricta Bostr.6864s0256 I 0.672
Cagra.4491s0006 Capsella grandiflora Cagra.4491s0006 I 0.672
Bostr.0568s0184 Boechera stricta Bostr.0568s0184 I 0.672
Thhalv10004691m.g Eutrema salsugineum Thhalv10004691m.g I 0.672
Carubv10017722m.g Capsella rubella Carubv10017722m.g I 0.672
Thhalv10010562m.g Eutrema salsugineum Thhalv10010562m.g I 0.672
MTR_1g041765 Medicago truncatula MTR_1g041765 I 0.667
OB01G30760 Oryza brachyantha OB01G30760 I 0.665
TRB2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8002157 I 0.662
TRB2 Arabidopsis thaliana AT5G67580 D 0.662