AT1G49010 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT1G49010 T266348_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G49010
M01269_2.00		 Arabidopsis thaliana
NNYWATCNN
NNGATWRNN		 PBM
Lambert et al.(2019)
pTH11535		 (Direct) (Direct)
AT1G49010
M07022_2.00		 Arabidopsis thaliana
NHHWWYCTTATCYWH
DWRGATAAGRWWDDN		 Dap-seq
OMalley et al.(2016)
At1g49010_col_a		 (Direct) (Direct)
AT1G49010
M07023_2.00		 Arabidopsis thaliana
WWYCTTATCYWHWHH
DDWDWRGATAAGRWW		 Dap-seq
OMalley et al.(2016)
At1g49010_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19621.1
M01280_2.00 		Cannabis sativa
NNTTATCYN
NRGATAANN		 PBM
Lambert et al.(2019)
pTH10140 		0.712 0.824
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01269_2.00 Myb 135 180

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G49010.1 Myb 135 180

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

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27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action