CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYB90
(
Arabidopsis thaliana
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AT1G66390
T266360_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Encodes a putative MYB domain containing transcription factor involved in anthocyanin metabolism and radical scavenging. Essential for the sucrose-mediated expression of the dihydroflavonol reductase gene. Auxin and ethylene responsiveness of PAP1 transcription is lost in myb12 mutants.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB113
M07026_2.00
Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB
Dap-seq
OMalley et al.(2016)
MYB113_col_a
0.826
0.892
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G66390.1
Myb
10
57
KGAWTAEEDSLLRLCIDKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYL
AT1G66390.1
Myb
63
108
RGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis thaliana
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy