TRFL6 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT1G72650 T266369_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Arabidopsis thaliana myb family transcription factor (At1g17460)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G72650.1 Myb 534 584
AT1G72650.2 Myb 540 590

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cagra.1013s0036 Capsella grandiflora Cagra.1013s0036 N 0.881
Carubv10019876m.g Capsella rubella Carubv10019876m.g N 0.881
Bostr.10273s0086 Boechera stricta Bostr.10273s0086 N 0.881
TRFL6 Arabidopsis lyrata fgenesh2_kg.2__1530__AT1G72650.2 N 0.881
Thhalv10018282m.g Eutrema salsugineum Thhalv10018282m.g N 0.863
Cucsa.360310 Cucumis sativus Cucsa.360310 N 0.863
Bra016044 Brassica rapa Bra016044 N 0.803
Lus10037678.g Linum usitatissimum Lus10037678.g N 0.784
Lus10015664.g Linum usitatissimum Lus10015664.g N 0.784
Pavir.J06110 Panicum virgatum Pavir.J06110 N 0.773
Sb04g034770 Sorghum bicolor Sb04g034770 N 0.773
Pavir.Aa00316 Panicum virgatum Pavir.Aa00316 N 0.773
GRMZM2G049194 Zea mays GRMZM2G049194 N 0.773
Si016649m.g Setaria italica Si016649m.g N 0.773
Bra003870 Brassica rapa Bra003870 N 0.768
Bra003871 Brassica rapa Bra003871 N 0.768
Cla015802 Citrullus lanatus Cla015802 N 0.767
Aquca_076_00106 Aquilegia coerulea Aquca_076_00106 N 0.767
OS02G0776700 Oryza sativa OS02G0776700 N 0.765
ORUFI02G36040 Oryza rufipogon ORUFI02G36040 N 0.765
ORGLA02G0298600 Oryza glaberrima ORGLA02G0298600 N 0.765
BGIOSGA009134 Oryza indica BGIOSGA009134 N 0.765
LPERR02G28410 Leersia perrieri LPERR02G28410 N 0.765
OBART02G34530 Oryza barthii OBART02G34530 N 0.765
OB02G41350 Oryza brachyantha OB02G41350 N 0.765
ONIVA02G36570 Oryza nivara ONIVA02G36570 N 0.765
OGLUM02G35670 Oryza glumaepatula OGLUM02G35670 N 0.765
Ciclev10025094m.g Citrus clementina Ciclev10025094m.g N 0.759
Bo6g091360 Brassica oleracea Bo6g091360 N 0.759
TCM_029115 Theobroma cacao TCM_029115 N 0.759
orange1.1g006062m.g Citrus sinensis orange1.1g006062m.g N 0.759
PK02666.1 Cannabis sativa PK02666.1 N 0.759
Gorai.011G058300 Gossypium raimondii Gorai.011G058300 N 0.759
GSMUA_Achr5G24660_001 Musa acuminata GSMUA_Achr5G24660_001 N 0.749
Carubv10012426m.g Capsella rubella Carubv10012426m.g N 0.746
Cagra.0824s0115 Capsella grandiflora Cagra.0824s0115 N 0.746
Solyc03g121990.2 Solanum lycopersicum Solyc03g121990.2 N 0.730
mgf013194m Mimulus guttatus mgf013194m N 0.728
Bostr.7128s0357 Boechera stricta Bostr.7128s0357 N 0.711
evm.TU.supercontig_25.106 Carica papaya evm.TU.supercontig_25.106 N 0.707
Thhalv10007199m.g Eutrema salsugineum Thhalv10007199m.g N 0.706
TRFL3 Arabidopsis lyrata fgenesh2_kg.1__1907__AT1G17460.1 N 0.700
SapurV1A.5380s0010 Salix purpurea SapurV1A.5380s0010 N 0.699
POPTR_0003s06240 Populus trichocarpa POPTR_0003s06240 N 0.699
POPTR_0001s17020 Populus trichocarpa POPTR_0001s17020 N 0.699
GLYMA16G00870 Glycine max GLYMA16G00870 N 0.699
GLYMA07G04160 Glycine max GLYMA07G04160 N 0.699
SapurV1A.0177s0370 Salix purpurea SapurV1A.0177s0370 N 0.699
SapurV1A.0002s0820 Salix purpurea SapurV1A.0002s0820 N 0.699
cassava159.valid.m1 Manihot esculenta cassava159.valid.m1 N 0.699
29706.m001295 Ricinus communis 29706.m001295 N 0.699
VIT_09s0002g01480 Vitis vinifera VIT_09s0002g01480 N 0.699
cassava31568.valid.m1 Manihot esculenta cassava31568.valid.m1 N 0.699
TRIUR3_15439 Triticum urartu TRIUR3_15439 N 0.696
F775_05862 Aegilops tauschii F775_05862 N 0.696
Traes_3AL_B71F3F028 Triticum aestivum Traes_3AL_B71F3F028 N 0.696
Traes_3DL_A631E1F0C Triticum aestivum Traes_3DL_A631E1F0C N 0.696
PDK_20s1505221g001 Phoenix dactylifera PDK_20s1505221g001 N 0.689
BRADI3G57300 Brachypodium distachyon BRADI3G57300 N 0.676
MLOC_56874 Hordeum vulgare MLOC_56874 N 0.676
TRAES3BF079700090CFD_g Triticum aestivum TRAES3BF079700090CFD_g N 0.676
AMTR_s00009p00103030 Amborella trichopoda AMTR_s00009p00103030 N 0.675
PRUPE_ppa003052mg Prunus persica PRUPE_ppa003052mg N 0.670
MDP0000261067 Malus domestica MDP0000261067 N 0.670
gene07405-v1.0-hybrid Fragaria vesca gene07405-v1.0-hybrid N 0.670
MDP0000279204 Malus domestica MDP0000279204 N 0.670
Pm013286 Prunus mume Pm013286 N 0.670
29638.m000522 Ricinus communis 29638.m000522 N 0.665