MYB88 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT2G02820 T266381_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB88
M07042_2.00
Arabidopsis thaliana
NNNHNACGCKCCDHH

DDHGGMGCGTNDNNN
Dap-seq
OMalley et al.(2016)
MYB88_col_a
(Direct) (Direct)
MYB88
M07043_2.00
Arabidopsis thaliana
NNNACGCTCCHNN

NNDGGAGCGTNNN
Dap-seq
OMalley et al.(2016)
MYB88_colamp_a
(Direct) (Direct)
MYB88
M11038_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB88_01
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB124
M01267_2.00
Arabidopsis thaliana
NNVCGCKCBN

NVGMGCGBNN
PBM
Lambert et al.(2019)
pTH11556
0.824 0.912
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G02820.1 Myb 31 76
AT2G02820.1 Myb 82 126
AT2G02820.2 Myb 31 76
AT2G02820.2 Myb 82 126
AT2G02820.3 Myb 31 76
AT2G02820.3 Myb 82 126

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZNF575 Bos taurus ENSBTAG00000030939 N 0.000
Zfp575 Mus musculus ENSMUSG00000066721 N 0.000
ENSNLEG00000001444 Nomascus leucogenys ENSNLEG00000001444 N 0.000
ZNF575 Otolemur garnettii ENSOGAG00000027522 N 0.000
ENSPANG00000009698 Papio anubis ENSPANG00000009698 N 0.000
ENSPPYG00000010062 Pongo abelii ENSPPYG00000010062 N 0.000
ZNF575 Pan troglodytes ENSPTRG00000011083 N 0.000
Zfp575 Rattus norvegicus ENSRNOG00000024065 N 0.000
ZNF575 Sus scrofa ENSSSCG00000003054 N 0.000
ENSSTOG00000011869 Ictidomys tridecemlineatus ENSSTOG00000011869 N 0.000
ENSTSYG00000011195 Tarsius syrichta ENSTSYG00000011195 N 0.000
ZNF575 Tursiops truncatus ENSTTRG00000014765 N 0.000
ENSP00000413956-D1 Bos grunniens ENSP00000413956-D1 N 0.000
ENSMPUG00000006853 Mustela putorius furo ENSMPUG00000006853 N 0.000
ZNF575 Macaca mulatta ENSMMUG00000019265 N 0.000
ZNF575 Canis familiaris ENSCAFG00000004751 N 0.000
ZNF575 Callithrix jacchus ENSCJAG00000013599 N 0.000
ENSCPOG00000001961 Cavia porcellus ENSCPOG00000001961 N 0.000
ENSCSAG00000003403 Chlorocebus sabaeus ENSCSAG00000003403 N 0.000
ZNF575 Dasypus novemcinctus ENSDNOG00000040867 N 0.000
ZNF575 Equus caballus ENSECAG00000013686 N 0.000
ZNF575 Felis catus ENSFCAG00000005221 N 0.000
ZNF575 Homo sapiens ENSG00000176472 N 0.000
ZNF575 Gorilla gorilla ENSGGOG00000003958 N 0.000
ZNF575 Loxodonta africana ENSLAFG00000016599 N 0.000
ENSMICG00000014659 Microcebus murinus ENSMICG00000014659 N 0.000
ZNF575 Myotis lucifugus ENSMLUG00000028273 N 0.000
Myotis_brandtii_ZNF575_10005601 Myotis brandtii Myotis_brandtii_ZNF575_10005601 N 0.000