TF Information

MYB88 *(Arabidopsis thaliana)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	AT2G02820	T266381_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB88 M07042_2.00	Arabidopsis thaliana	NNNHNACGCKCCDHH	DDHGGMGCGTNDNNN	Dap-seq OMalley et al.(2016) MYB88_col_a	(Direct)	(Direct)
MYB88 M07043_2.00	Arabidopsis thaliana	NNNACGCTCCHNN	NNDGGAGCGTNNN	Dap-seq OMalley et al.(2016) MYB88_colamp_a	(Direct)	(Direct)
MYB88 M11038_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYB88_01	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB124 M01267_2.00	Arabidopsis thaliana	NNVCGCKCBN	NVGMGCGBNN	PBM Lambert et al.(2019) pTH11556	0.824	0.912
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AT2G02820.1	Myb	31	76	VTWSPEEDDILRKQISLQGTENWAIIASKFNDKSTRQCRRRWYTYL
AT2G02820.1	Myb	82	126	RGGWSPEEDTLLCEAQRLFGNRWTEIAKVVSGRTDNAVKNRFTTL
AT2G02820.2	Myb	31	76	VTWSPEEDDILRKQISLQGTENWAIIASKFNDKSTRQCRRRWYTYL
AT2G02820.2	Myb	82	126	RGGWSPEEDTLLCEAQRLFGNRWTEIAKVVSGRTDNAVKNRFTTL
AT2G02820.3	Myb	31	76	VTWSPEEDDILRKQISLQGTENWAIIASKFNDKSTRQCRRRWYTYL
AT2G02820.3	Myb	82	126	RGGWSPEEDTLLCEAQRLFGNRWTEIAKVVSGRTDNAVKNRFTTL

Links
Other Myb/SANT family TFs
Other *Arabidopsis thaliana* TFs

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76 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action