RAX2 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT2G36890 T266401_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
''Putative homolog of the Blind gene in tomato. Together with RAX2 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB37, regulates axillary meristem formation. RAX1 is expressed in a small central domain within the boundary zone separating SAM and leaf primordia during early leaf primordium development and is currently the earliest spatial marker for future axillary meristems. Member of the R2R3 factor gene family.''

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.762 0.806
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.762 0.806
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G36890.1 Myb 14 62
AT2G36890.1 Myb 68 113
AT2G36890.2 Myb 55 103
AT2G36890.2 Myb 109 154

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

449 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action