TF Information

AT2G40260 *(Arabidopsis thaliana)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	AT2G40260	T266408_2.00	Ensembl (2018-Dec-8)	Link out
NCBI Gene Info: Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
AT2G40260 M07057_2.00	Arabidopsis thaliana	HHWDWAHATTCYHTN	NADRGAATDTWHWDD	Dap-seq OMalley et al.(2016) AT2G40260_col_a	(Direct)	(Direct)
AT2G40260 M07058_2.00	Arabidopsis thaliana	NNDDWHHNDDWAHATTCYHT	ADRGAATDTWHHNDDWHHNN	Dap-seq OMalley et al.(2016) AT2G40260_colamp_a	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK26523.1 M01283_2.00	Cannabis sativa	NWHATTCYNN	NNRGAATDWN	PBM Lambert et al.(2019) pTH11304	0.870	0.894
AT2G38300 M07056_2.00	Arabidopsis thaliana	WAHATTCYHTH	DADRGAATDTW	Dap-seq OMalley et al.(2016) AT2G38300_col_a	0.793	0.830
PHL6 M02295_2.00	Arabidopsis thaliana	NNWKATNCBN	NVGNATMWNN	PBM Weirauch et al.(2014) pTH7071	0.689	0.702
PHL6 M07083_2.00	Arabidopsis thaliana	NDGAAAACH	DGTTTTCHN	Dap-seq OMalley et al.(2016) At3g13040_col_b	0.689	0.702
PHL1 M02310_2.00	Arabidopsis thaliana	NWKATNCBNN	NNVGNATMWN	PBM Weirauch et al.(2014) pTH7122	0.674	0.702
PHL1 M07132_2.00	Arabidopsis thaliana	MDRGAATATTCBNWN	NWNVGAATATTCYHK	Dap-seq OMalley et al.(2016) At5g29000_col_a	0.674	0.702
For this family, TFs with SR scores > 0.661* will likely have a similar motif*