MYB83 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT3G08500 T266425_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes MYB46, member of the R2R3 factor gene family. Modulates Disease Susceptibility to Botrytis cinerea.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB83
M01073_2.00
Arabidopsis thaliana
YACCHACC

GGTDGGTR
PBM
Sullivan et al.(2014)
pTH7140
(Direct) (Direct)
MYB83
M07066_2.00
Arabidopsis thaliana
YCACCAACHNH

DNDGTTGGTGR
Dap-seq
OMalley et al.(2016)
MYB83_col_a
(Direct) (Direct)
MYB83
M07067_2.00
Arabidopsis thaliana
NCACCWAMCDNHNNN

NNNDNHGKTWGGTGN
Dap-seq
OMalley et al.(2016)
MYB83_colamp_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB46
M00877_2.00
Arabidopsis thaliana
NAMCNDHHN

NDDHNGKTN
PBM
Franco-Zorrilla et al.(2014)
MYB46
0.803 0.849
MYB46
M11046_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB46_Q6
0.803 0.849
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD

HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.704 0.731
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD

HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.704 0.731
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH

DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.704 0.731
MYB61
M07002_2.00
Arabidopsis thaliana
HNYAMCHACCDNHNH

DNDNHGGTDGKTRND
Dap-seq
OMalley et al.(2016)
MYB61_col_a
0.698 0.720
MYB61
M07003_2.00
Arabidopsis thaliana
NHNYACCWAMCDH

DHGKTWGGTRNDN
Dap-seq
OMalley et al.(2016)
MYB61_colamp_a
0.698 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01073_2.00 Myb 32 79
M01073_2.00 Myb 85 130

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G08500.1 Myb 32 79
AT3G08500.1 Myb 85 130

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

606 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
21800_YPL128C Saccharomyces mikatae 21800_YPL128C I 0.000
22419_YPL128C Saccharomyces paradoxus 22419_YPL128C I 0.000
AACERI_AaceriACR096W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACR096W I 0.000
AGOS_ACR096W Ashbya gossypii AGOS_ACR096W I 0.000
BN7_5968 Wickerhamomyces ciferrii BN7_5968 I 0.000
CAGL0M02761g Candida glabrata CAGL0M02761g I 0.000
CANTEDRAFT_127045 Candida tenuis CANTEDRAFT_127045 I 0.000
CLUG_01092 Candida lusitaniae CLUG_01092 I 0.000
CLUG_01092 Clavispora lusitaniae CLUG_01092 I 0.000
DEHA2C16346g Debaryomyces hansenii DEHA2C16346g I 0.000
Ecym_8316 Eremothecium cymbalariae Ecym_8316 I 0.000
e_gwh1.5.1.153.1 Pichia stipitis e_gwh1.5.1.153.1 I 0.000
GNLVRS01_PISO0K21658g Millerozyma farinosa GNLVRS01_PISO0K21658g I 0.000
GNLVRS01_PISO0L21659g Millerozyma farinosa GNLVRS01_PISO0L21659g I 0.000
KAFR_0H02660 Kazachstania africana KAFR_0H02660 I 0.000
KLLA0_D06765g Kluyveromyces lactis KLLA0_D06765g I 0.000
KLTH0D10164g Kluyveromyces thermotolerans KLTH0D10164g I 0.000
KLTH0D10164g Lachancea thermotolerans KLTH0D10164g I 0.000
KNAG_0J01470 Kazachstania naganishii KNAG_0J01470 I 0.000
Kpol_1072p42 Vanderwaltozyma polyspora Kpol_1072p42 I 0.000
Kpol_530p11 Vanderwaltozyma polyspora Kpol_530p11 I 0.000
Kwal_8619 Kluyveromyces waltii Kwal_8619 I 0.000
LALA0_S10e01860g Lachancea lanzarotensis LALA0_S10e01860g I 0.000
NCAS_0C01470 Naumovozyma castellii NCAS_0C01470 I 0.000
NDAI_0E02210 Naumovozyma dairenensis NDAI_0E02210 I 0.000
PICST_47348 Scheffersomyces stipitis PICST_47348 I 0.000
SAKL0H07678g Lachancea kluyveri SAKL0H07678g I 0.000
Scas_Contig700.45 Saccharomyces castellii Scas_Contig700.45 I 0.000
SKUD_201904 Saccharomyces kudriavzevii SKUD_201904 I 0.000
SU7_3534 Saccharomyces arboricola SU7_3534 I 0.000
TBLA_0B04080 Tetrapisispora blattae TBLA_0B04080 I 0.000
TDEL_0A05760 Torulaspora delbrueckii TDEL_0A05760 I 0.000
TPHA_0F03170 Tetrapisispora phaffii TPHA_0F03170 I 0.000
TPHA_0G01850 Tetrapisispora phaffii TPHA_0G01850 I 0.000
TBF1 Saccharomyces cerevisiae YPL128C D 0.000
ZBAI_00516 Zygosaccharomyces bailii ZBAI_00516 I 0.000
ZBAI_05815 Zygosaccharomyces bailii ZBAI_05815 I 0.000
ZYRO0F06292g Zygosaccharomyces rouxii ZYRO0F06292g I 0.000