CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT3G11280
(
Arabidopsis thaliana
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AT3G11280
T266435_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Encodes a hexokinase (HXK1) in the plant glucose-signaling network. Functions as a glucose sensor to interrelate nutrient, light, and hormone signaling networks for controlling growth and development in response to the changing environment.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G11280
M01075_2.00
Arabidopsis thaliana
NNTTATCNNN
NNNGATAANN
PBM
Sullivan et al.(2014)
pTH7245
(Direct)
(Direct)
AT3G11280
M07074_2.00
Arabidopsis thaliana
DWDWDGATAAKRWW
WWYMTTATCHWHWH
Dap-seq
OMalley et al.(2016)
At3g11280_col_a
(Direct)
(Direct)
AT3G11280
M07075_2.00
Arabidopsis thaliana
NNWNNDGATAAGRWHDNN
NNHDWYCTTATCHNNWNN
Dap-seq
OMalley et al.(2016)
At3g11280_colamp_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT5G05790
M07119_2.00
Arabidopsis thaliana
HWYMTTATCHWNWHH
DDWNWDGATAAKRWD
Dap-seq
OMalley et al.(2016)
At5g05790_col_a
0.751
0.915
For this family, TFs with SR scores >
0.661
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01075_2.00
Myb
126
173
GVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYY
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G11280.1
Myb
126
173
GVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYY
AT3G11280.2
Myb
126
173
GVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYY
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis thaliana
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy