CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MYB4R1
(
Arabidopsis thaliana
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AT3G18100
T266447_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Member of the R2R3 transcription factor gene family.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G18100.1
Myb
348
366
RRKWSTEENKNLAKGLKQE
AT3G18100.1
Myb
442
489
HGPWTAAEDKNLLRTIEQTSLTDWVDIAVSLGTNRTPFQCLARYQRSL
AT3G18100.1
Myb
495
541
KKEWTAEEDDQLRTAVELFGEKDWQSVANVLKGRTGTQCSNRWKKSL
AT3G18100.1
Myb
546
592
KGTWSLEEDKRVKVAVTLFGSQNWHKISQFVPGRTQTQCRERWLNCL
AT3G18100.1
Myb
598
643
RGKWTEEEDEKLREAIAEHGYSWSKVATNLSCRTDNQCLRRWKRLY
AT3G18100.2
Myb
135
153
RRKWSTEENKNLAKGLKQE
AT3G18100.2
Myb
229
276
HGPWTAAEDKNLLRTIEQTSLTDWVDIAVSLGTNRTPFQCLARYQRSL
AT3G18100.2
Myb
282
328
KKEWTAEEDDQLRTAVELFGEKDWQSVANVLKGRTGTQCSNRWKKSL
AT3G18100.2
Myb
333
379
KGTWSLEEDKRVKVAVTLFGSQNWHKISQFVPGRTQTQCRERWLNCL
AT3G18100.2
Myb
385
430
RGKWTEEEDEKLREAIAEHGYSWSKVATNLSCRTDNQCLRRWKRLY
AT3G18100.3
Myb
300
318
RRKWSTEENKNLAKGLKQE
AT3G18100.3
Myb
394
441
HGPWTAAEDKNLLRTIEQTSLTDWVDIAVSLGTNRTPFQCLARYQRSL
AT3G18100.3
Myb
447
493
KKEWTAEEDDQLRTAVELFGEKDWQSVANVLKGRTGTQCSNRWKKSL
AT3G18100.3
Myb
498
544
KGTWSLEEDKRVKVAVTLFGSQNWHKISQFVPGRTQTQCRERWLNCL
AT3G18100.3
Myb
550
595
RGKWTEEEDEKLREAIAEHGYSWSKVATNLSCRTDNQCLRRWKRLY
AT3G18100.4
Myb
187
205
RRKWSTEENKNLAKGLKQE
AT3G18100.4
Myb
281
328
HGPWTAAEDKNLLRTIEQTSLTDWVDIAVSLGTNRTPFQCLARYQRSL
AT3G18100.4
Myb
334
380
KKEWTAEEDDQLRTAVELFGEKDWQSVANVLKGRTGTQCSNRWKKSL
AT3G18100.4
Myb
385
431
KGTWSLEEDKRVKVAVTLFGSQNWHKISQFVPGRTQTQCRERWLNCL
AT3G18100.4
Myb
437
482
RGKWTEEEDEKLREAIAEHGYSWSKVATNLSCRTDNQCLRRWKRLY
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis thaliana
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYB4R1
Arabidopsis lyrata
fgenesh2_kg.3__2002__AT3G18100.1
N
0.831
Bostr.19424s0860
Boechera stricta
Bostr.19424s0860
N
0.812
Carubv10012991m.g
Capsella rubella
Carubv10012991m.g
N
0.793
scaffold_703601.1
Arabidopsis lyrata
scaffold_703601.1
N
0.728
Bo00828s010
Brassica oleracea
Bo00828s010
N
0.686
fgenesh1_pg.C_scaffold_7001962
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_7001962
N
0.670