ATMYB121 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT3G30210 T266460_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB121).

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.716 0.742
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.716 0.742
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.688 0.699
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.688 0.699
MYB27
M07097_2.00
Arabidopsis thaliana
HHTACCTAAYTTWWN

NWWAARTTAGGTADD
Dap-seq
OMalley et al.(2016)
MYB27_col_a
0.680 0.656
MYB27
M07098_2.00
Arabidopsis thaliana
NYHTACCTAAYTTWHN

NDWAARTTAGGTADRN
Dap-seq
OMalley et al.(2016)
MYB27_colamp_a
0.680 0.656
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.669 0.656
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G30210.1 Myb 29 76
AT3G30210.1 Myb 82 127

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

428 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29794.m003381 Ricinus communis 29794.m003381 I 0.000
AMTR_s00056p00064760 Amborella trichopoda AMTR_s00056p00064760 I 0.000
AMTR_s00111p00051610 Amborella trichopoda AMTR_s00111p00051610 I 0.000
Bo2g010530 Brassica oleracea Bo2g010530 I 0.000
Bo4g184540 Brassica oleracea Bo4g184540 I 0.000
Bo9g170060 Brassica oleracea Bo9g170060 I 0.000
Bostr.20055s0079 Boechera stricta Bostr.20055s0079 I 0.000
Bra008952 Brassica rapa Bra008952 I 0.000
Bra017302 Brassica rapa Bra017302 I 0.000
Bra023332 Brassica rapa Bra023332 I 0.000
Carubv10003136m.g Capsella rubella Carubv10003136m.g I 0.000
cassava17185.m1 Manihot esculenta cassava17185.m1 I 0.000
cassava18256.valid.m1 Manihot esculenta cassava18256.valid.m1 I 0.000
Ca_01908 Cicer arietinum Ca_01908 I 0.000
Ca_28185 Cicer arietinum Ca_28185 I 0.000
chr1.CM0171.140.nc Lotus japonicus chr1.CM0171.140.nc I 0.000
Ciclev10009370m.g Citrus clementina Ciclev10009370m.g I 0.000
Cla022553 Citrullus lanatus Cla022553 I 0.000
Cucsa.161310 Cucumis sativus Cucsa.161310 I 0.000
DREB3 Arabidopsis thaliana AT5G11590 I 0.000
Eucgr.C00546 Eucalyptus grandis Eucgr.C00546 I 0.000
Eucgr.C02928 Eucalyptus grandis Eucgr.C02928 I 0.000
Eucgr.E01593 Eucalyptus grandis Eucgr.E01593 I 0.000
evm.TU.supercontig_7.269 Carica papaya evm.TU.supercontig_7.269 I 0.000
gene08838-v1.0-hybrid Fragaria vesca gene08838-v1.0-hybrid I 0.000
gene25758-v1.0-hybrid Fragaria vesca gene25758-v1.0-hybrid I 0.000
GLYMA03G27050 Glycine max GLYMA03G27050 I 0.000
GLYMA04G08901 Glycine max GLYMA04G08901 I 0.000
GLYMA06G08990 Glycine max GLYMA06G08990 I 0.000
GLYMA07G14560 Glycine max GLYMA07G14560 I 0.000
GLYMA13G43210 Glycine max GLYMA13G43210 I 0.000
GLYMA14G22740 Glycine max GLYMA14G22740 I 0.000
GLYMA15G02130 Glycine max GLYMA15G02130 I 0.000
GLYMA17G27520 Glycine max GLYMA17G27520 I 0.000
Gorai.004G289800 Gossypium raimondii Gorai.004G289800 I 0.000
Gorai.010G106600 Gossypium raimondii Gorai.010G106600 I 0.000
GSMUA_Achr10G21470_001 Musa acuminata GSMUA_Achr10G21470_001 I 0.000
GSMUA_Achr7G09450_001 Musa acuminata GSMUA_Achr7G09450_001 I 0.000
LjT43F20.80.nd Lotus japonicus LjT43F20.80.nd I 0.000
MDP0000174352 Malus domestica MDP0000174352 I 0.000
MDP0000241650 Malus domestica MDP0000241650 I 0.000
MDP0000242611 Malus domestica MDP0000242611 I 0.000
mgf024703m Mimulus guttatus mgf024703m I 0.000
MTR_3g110205 Medicago truncatula MTR_3g110205 I 0.000
MTR_8g013860 Medicago truncatula MTR_8g013860 I 0.000
orange1.1g027107m.g Citrus sinensis orange1.1g027107m.g I 0.000
PGSC0003DMG400002235 Solanum tuberosum PGSC0003DMG400002235 I 0.000
PGSC0003DMG400018581 Solanum tuberosum PGSC0003DMG400018581 I 0.000
PK28082.1 Cannabis sativa PK28082.1 I 0.000
Pm005151 Prunus mume Pm005151 I 0.000
POPTR_0006s25500 Populus trichocarpa POPTR_0006s25500 I 0.000
PRUPE_ppa009533mg Prunus persica PRUPE_ppa009533mg I 0.000
SapurV1A.0272s0090 Salix purpurea SapurV1A.0272s0090 I 0.000
SapurV1A.0291s0070 Salix purpurea SapurV1A.0291s0070 I 0.000
Solyc08g066660.1 Solanum lycopersicum Solyc08g066660.1 I 0.000
TCM_037194 Theobroma cacao TCM_037194 I 0.000
Thhalv10015895m.g Eutrema salsugineum Thhalv10015895m.g I 0.000
TINY2 Arabidopsis lyrata fgenesh2_kg.6__1130__AT5G11590.1 I 0.000
VIT_00s0341g00070 Vitis vinifera VIT_00s0341g00070 I 0.000
VIT_00s0632g00010 Vitis vinifera VIT_00s0632g00010 I 0.000
VIT_04s0008g03400 Vitis vinifera VIT_04s0008g03400 I 0.000
VIT_15s0021g02110 Vitis vinifera VIT_15s0021g02110 I 0.000