ATMYB121 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT3G30210 T266460_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB121).

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.716 0.742
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.716 0.742
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.688 0.699
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.688 0.699
MYB27
M07097_2.00
Arabidopsis thaliana
HHTACCTAAYTTWWN

NWWAARTTAGGTADD
Dap-seq
OMalley et al.(2016)
MYB27_col_a
0.680 0.656
MYB27
M07098_2.00
Arabidopsis thaliana
NYHTACCTAAYTTWHN

NDWAARTTAGGTADRN
Dap-seq
OMalley et al.(2016)
MYB27_colamp_a
0.680 0.656
Q2TCH0_PETHY
M11072_2.00
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Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.669 0.656
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G30210.1 Myb 29 76
AT3G30210.1 Myb 82 127

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

Invalid Input OrderBy

428 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action