AT3G53440 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT3G53440 T266470_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a zinc finger protein containing only a single zinc finger.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G53440.1 Myb 258 306
AT3G53440.2 Myb 258 306

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.11793s0050 Boechera stricta Bostr.11793s0050 N 0.909
fgenesh2_kg.5__1710__AT3G53440.2 Arabidopsis lyrata fgenesh2_kg.5__1710__AT3G53440.2 N 0.909
Carubv10016941m.g Capsella rubella Carubv10016941m.g N 0.905
Cagra.0612s0070 Capsella grandiflora Cagra.0612s0070 N 0.905
Thhalv10010289m.g Eutrema salsugineum Thhalv10010289m.g N 0.830
Bo8g082820 Brassica oleracea Bo8g082820 N 0.790
Bo8g082840 Brassica oleracea Bo8g082840 N 0.790
AMTR_s00044p00144500 Amborella trichopoda AMTR_s00044p00144500 N 0.757
PK06741.1 Cannabis sativa PK06741.1 N 0.740
evm.TU.supercontig_129.20 Carica papaya evm.TU.supercontig_129.20 N 0.720
Pm002284 Prunus mume Pm002284 N 0.713
PRUPE_ppa003947mg Prunus persica PRUPE_ppa003947mg N 0.713
mgf021292m Mimulus guttatus mgf021292m N 0.702
POPTR_0018s04230 Populus trichocarpa POPTR_0018s04230 N 0.695
Lus10002159.g Linum usitatissimum Lus10002159.g N 0.671
VIT_17s0000g03540 Vitis vinifera VIT_17s0000g03540 N 0.661