CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
KAN3
(
Arabidopsis thaliana
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AT4G17695
T266492_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KAN2
M07018_2.00
Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD
Dap-seq
OMalley et al.(2016)
KAN2_col_a
0.860
0.957
KAN2
M07019_2.00
Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN
Dap-seq
OMalley et al.(2016)
KAN2_colamp_a
0.860
0.957
KAN4
M00881_2.00
Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN
PBM
Franco-Zorrilla et al.(2014)
KAN4
0.835
0.957
KAN1
M00878_2.00
Arabidopsis thaliana
NNRTNBNN
NNVNAYNN
PBM
Franco-Zorrilla et al.(2014)
KAN1
0.826
0.915
KAN1
M02308_2.00
Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN
PBM
Weirauch et al.(2014)
pTH7135
0.826
0.915
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.667
0.723
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G17695.1
Myb
166
217
RMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYR
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis thaliana
TFs
356 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy