TF Information

PC-MYB1 *(Arabidopsis thaliana)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	AT4G32730	T266503_2.00	Ensembl (2018-Dec-8)	Link out
NCBI Gene Info: Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4. Functions in powdery mildew induced host endoreduplication at the site of infection.
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PC-MYB1 M07110_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R1_col_a	(Direct)	(Direct)
PC-MYB1 M07111_2.00	Arabidopsis thaliana	DWHNTDRCCGTTR	YAACGGYHANDWH	Dap-seq OMalley et al.(2016) MYB3R1_colamp_a	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q948S5_TOBAC M11074_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBA2_01	0.828	0.885
PK12011.1 M01279_2.00	Cannabis sativa	HAACGGHHNN	NNDDCCGTTD	PBM Lambert et al.(2019) pTH11423	0.800	0.871
MYB3R4 M07125_2.00	Arabidopsis thaliana	NDWWNTDRCCGTTRN	NYAACGGYHANWWHN	Dap-seq OMalley et al.(2016) MYB3R4_col_a	0.757	0.835
Q948S6_TOBAC M11075_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBA1_01	0.680	0.791
Q948S4_TOBAC M11073_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBB_01	0.670	0.719
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AT4G32730.1	Myb	35	81	KGQWTPEEDEVLCKAVERFQGKNWKKIAECFKDRTDVQCLHRWQKVL
AT4G32730.1	Myb	87	133	KGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHL
AT4G32730.1	Myb	139	183	KNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSS
AT4G32730.2	Myb	35	81	KGQWTPEEDEVLCKAVERFQGKNWKKIAECFKDRTDVQCLHRWQKVL
AT4G32730.2	Myb	87	133	KGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHL
AT4G32730.2	Myb	139	183	KNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSS
AT4G32730.3	Myb	35	81	KGQWTPEEDEVLCKAVERFQGKNWKKIAECFKDRTDVQCLHRWQKVL
AT4G32730.3	Myb	87	133	KGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHL
AT4G32730.3	Myb	139	183	KNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSS
AT4G32730.4	Myb	35	81	KGQWTPEEDEVLCKAVERFQGKNWKKIAECFKDRTDVQCLHRWQKVL
AT4G32730.4	Myb	87	133	KGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHL
AT4G32730.4	Myb	139	183	KNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSS
AT4G32730.5	Myb	35	81	KGQWTPEEDEVLCKAVERFQGKNWKKIAECFKDRTDVQCLHRWQKVL
AT4G32730.5	Myb	87	133	KGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHL
AT4G32730.5	Myb	139	183	KNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSS

Links
Other Myb/SANT family TFs
Other *Arabidopsis thaliana* TFs

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154 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action