MYB3R5 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT5G02320 T266511_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
putative c-myb-like transcription factor (MYB3R3) mRNA

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00		 Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.664 0.786
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G02320.1 Myb 75 121
AT5G02320.1 Myb 127 173
AT5G02320.1 Myb 179 224
AT5G02320.2 Myb 75 121
AT5G02320.2 Myb 127 173
AT5G02320.2 Myb 179 224
AT5G02320.3 Myb 15 61
AT5G02320.3 Myb 67 113
AT5G02320.3 Myb 119 164

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I 0.898
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.880
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.860
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.860
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.849
Bra009597 Brassica rapa Bra009597 I 0.809
Bo9g184660 Brassica oleracea Bo9g184660 I 0.800
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.797
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.794
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.794
Bra034067 Brassica rapa Bra034067 I 0.794
Pm002704 Prunus mume Pm002704 I 0.794
Bo1g144510 Brassica oleracea Bo1g144510 I 0.794
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.790
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.789
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.784
MDP0000219581 Malus domestica MDP0000219581 I 0.783
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.781
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.781
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.777
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.777
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.777
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.775
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.775
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.774
TCM_021936 Theobroma cacao TCM_021936 I 0.774
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.773
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.772
MTR_7g061330 Medicago truncatula MTR_7g061330 I 0.771
MTR_7g461410 Medicago truncatula MTR_7g461410 I 0.771
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.771
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.770
29846.m000184 Ricinus communis 29846.m000184 I 0.769
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.768
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I 0.761
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.760
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.760
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.760
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I 0.757
GLYMA18G39740 Glycine max GLYMA18G39740 I 0.755
Si000842m.g Setaria italica Si000842m.g I 0.755
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.755
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.755
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I 0.755
Carubv10013377m.g Capsella rubella Carubv10013377m.g I 0.753
Cagra.2515s0028 Capsella grandiflora Cagra.2515s0028 I 0.753
Cla018173 Citrullus lanatus Cla018173 I 0.750
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.749
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.746
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.746
LPERR01G31650 Leersia perrieri LPERR01G31650 I 0.746
MYB3R-2 Oryza sativa OS01G0841500 I 0.746
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I 0.745
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.744
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.741
Solyc09g010820.2 Solanum lycopersicum Solyc09g010820.2 I 0.739
PGSC0003DMG400008908 Solanum tuberosum PGSC0003DMG400008908 I 0.739
Bra029762 Brassica rapa Bra029762 I 0.728
mgf019610m Mimulus guttatus mgf019610m I 0.727
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I 0.724
Bo5g139340 Brassica oleracea Bo5g139340 I 0.723
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.721
PK11664.1 Cannabis sativa PK11664.1 I 0.717
ONIVA05G20060 Oryza nivara ONIVA05G20060 I 0.707
OBART05G19200 Oryza barthii OBART05G19200 I 0.707
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I 0.707
BGIOSGA017917 Oryza indica BGIOSGA017917 I 0.707
OB01G45570 Oryza brachyantha OB01G45570 I 0.705
TRIUR3_29290 Triticum urartu TRIUR3_29290 I 0.704
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I 0.704
MDP0000179225 Malus domestica MDP0000179225 I 0.699
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I 0.698
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I 0.695
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.693
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.692
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I 0.691
OS05G0459000 Oryza sativa OS05G0459000 I 0.688
ORGLA05G0166300 Oryza glaberrima ORGLA05G0166300 I 0.688
MDP0000295807 Malus domestica MDP0000295807 I 0.679
OLONG_011208 Oryza longistaminata OLONG_011208 I 0.679
GLYMA17G26240 Glycine max GLYMA17G26240 I 0.678
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.675
OB12G16480 Oryza brachyantha OB12G16480 I 0.675
OS12G0238000 Oryza sativa OS12G0238000 I 0.675
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.675
Ca_21127 Cicer arietinum Ca_21127 I 0.674
Pm005124 Prunus mume Pm005124 I 0.672
GLYMA03G19470 Glycine max GLYMA03G19470 I 0.672
Ca_14925 Cicer arietinum Ca_14925 I 0.670
Si021484m.g Setaria italica Si021484m.g I 0.670
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.669
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.669
OB01G18340 Oryza brachyantha OB01G18340 I 0.668
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.667
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.665
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.665
Cla023357 Citrullus lanatus Cla023357 I 0.665
Lus10022136.g Linum usitatissimum Lus10022136.g I 0.664
PK12011.1 Cannabis sativa PK12011.1 D 0.664
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.663
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.662
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.662