CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT5G45420
(
Arabidopsis thaliana
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AT5G45420
T266556_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G45420.1
Myb
157
202
TKDWTAEEIEILKKQLIKHPAGKPGRWETVASAFGGRYKTENVIKK
AT5G45420.1
Myb
249
298
KEIWSNGEDIALLNALKAFPKEAAMRWEKIAAAVPGKSKAACMKRVTELK
AT5G45420.2
Myb
157
202
TKDWTAEEIEILKKQLIKHPAGKPGRWETVASAFGGRYKTENVIKK
AT5G45420.2
Myb
249
298
KEIWSNGEDIALLNALKAFPKEAAMRWEKIAAAVPGKSKAACMKRVTELK
AT5G45420.3
Myb
157
202
TKDWTAEEIEILKKQLIKHPAGKPGRWETVASAFGGRYKTENVIKK
AT5G45420.3
Myb
249
298
KEIWSNGEDIALLNALKAFPKEAAMRWEKIAAAVPGKSKAACMKRVTELK
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis thaliana
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.185__3__AT5G45420.1
Arabidopsis lyrata
fgenesh2_kg.185__3__AT5G45420.1
N
0.872
Bostr.8819s0063
Boechera stricta
Bostr.8819s0063
N
0.866
Carubv10026823m.g
Capsella rubella
Carubv10026823m.g
N
0.844
Cagra.0493s0019
Capsella grandiflora
Cagra.0493s0019
N
0.844
Bra025078
Brassica rapa
Bra025078
N
0.830
Bo7g072540
Brassica oleracea
Bo7g072540
N
0.822
Ca_09656
Cicer arietinum
Ca_09656
N
0.690