TF Information

AT5G56840 *(Arabidopsis thaliana)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	AT5G56840	T266569_2.00	Ensembl (2018-Dec-8)	Link out
NCBI Gene Info: Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes.
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
AT5G56840 M07144_2.00	Arabidopsis thaliana	WWYMTTATCCAWWWN	NWWWTGGATAAKRWW	Dap-seq OMalley et al.(2016) AT5G56840_col_a	(Direct)	(Direct)
AT5G56840 M07145_2.00	Arabidopsis thaliana	HHHWWYHTTATCCWHW	WDWGGATAADRWWDDD	Dap-seq OMalley et al.(2016) AT5G56840_colamp_a	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
fgenesh1_pg.scaffold_70000111 M02342_2.00	Physcomitrella patens	NNHNATCBN	NVGATNDNN	PBM Weirauch et al.(2014) pTH8492	0.799	0.872
KUA1 M02312_2.00	Arabidopsis thaliana	NNTTATCCDN	NHGGATAANN	PBM Weirauch et al.(2014) pTH7647	0.789	0.830
KUA1 M07136_2.00	Arabidopsis thaliana	WWHHTTATCCAHWW	WWDTGGATAADDWW	Dap-seq OMalley et al.(2016) At5g47390_colamp_a	0.789	0.830
KUA1 M07137_2.00	Arabidopsis thaliana	HHWDYHTTATCCAHW	WDTGGATAADRHWDD	Dap-seq OMalley et al.(2016) At5g47390_col_b	0.789	0.830
PK17526.1 M02353_2.00	Cannabis sativa	NNTTATCCAN	NTGGATAANN	PBM Weirauch et al.(2014) pTH9588	0.781	0.809
AT3G16350 M01078_2.00	Arabidopsis thaliana	NYTATCYDNN	NNHRGATARN	PBM Sullivan et al.(2014) pTH7149	0.778	0.830
PK23829.1 M02355_2.00	Cannabis sativa	VTTATCCD	HGGATAAB	PBM Weirauch et al.(2014) pTH9592	0.770	0.809
PK29550.1 M02358_2.00	Cannabis sativa	NNHDATCYNN	NNRGATHDNN	PBM Weirauch et al.(2014) pTH9595	0.768	0.830
PK00738.1 M02346_2.00	Cannabis sativa	NYWATCYDNN	NNHRGATWRN	PBM Weirauch et al.(2014) pTH9487	0.768	0.809
AT5G61620 M07149_2.00	Arabidopsis thaliana	WWHHTTATCCAHWWN	NWWDTGGATAADDWW	Dap-seq OMalley et al.(2016) AT5G61620_col_a	0.763	0.809
AT5G61620 M07150_2.00	Arabidopsis thaliana	YHTTATCCAHW	WDTGGATAADR	Dap-seq OMalley et al.(2016) AT5G61620_colamp_a	0.763	0.809
AT1G19000 M02287_2.00	Arabidopsis thaliana	NYTATCYDNN	NNHRGATARN	PBM Weirauch et al.(2014) pTH7120	0.756	0.787
AT1G19000 M07012_2.00	Arabidopsis thaliana	HDYHTTATCCAHWW	WWDTGGATAADRHD	Dap-seq OMalley et al.(2016) At1g19000_col_a	0.756	0.787
AT1G19000 M07013_2.00	Arabidopsis thaliana	WDYNTTATCCAHWW	WWDTGGATAANRHW	Dap-seq OMalley et al.(2016) At1g19000_colamp_a	0.756	0.787
0600010132 M02360_2.00	Ostreococcus tauri	NNVTTATCCDNNN	NNNHGGATAABNN	PBM Weirauch et al.(2014) pTH9441	0.732	0.830
AT3G10580 M07072_2.00	Arabidopsis thaliana	AWBCTTATCYWHWHH	DDWDWRGATAAGVWT	Dap-seq OMalley et al.(2016) AT3G10580_col_a	0.687	0.681
AT3G10580 M07073_2.00	Arabidopsis thaliana	CCGAWAAWNTCGGDD	HHCCGANWTTWTCGG	Dap-seq OMalley et al.(2016) AT3G10580_colamp_a	0.687	0.681
AT1G74840 M02291_2.00	Arabidopsis thaliana	NGWTATCCRNN	NNYGGATAWCN	PBM Weirauch et al.(2014) pTH7074	0.661	0.766
AT1G74840 M07037_2.00	Arabidopsis thaliana	HHTTATCCAHW	WDTGGATAADD	Dap-seq OMalley et al.(2016) At1g74840_col100_a	0.661	0.766
AT1G74840 M07038_2.00	Arabidopsis thaliana	HWNHTTATCCAHWW	WWDTGGATAADNWD	Dap-seq OMalley et al.(2016) At1g74840_colamp_a	0.661	0.766
For this family, TFs with SR scores > 0.661* will likely have a similar motif*