MYB28 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT5G61420 T266578_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB51
M07010_2.00
Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW

WRGTWGGTRRRNNNDNDDNDN
Dap-seq
OMalley et al.(2016)
MYB51_col_a
0.718 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G61420.1 Myb 1 33
AT5G61420.2 Myb 14 61
AT5G61420.2 Myb 67 112

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30045.m000471 Ricinus communis 30045.m000471 I 0.000
30076.m004693 Ricinus communis 30076.m004693 I 0.000
BGIOSGA029710 Oryza indica BGIOSGA029710 I 0.000
Bo2g155500 Brassica oleracea Bo2g155500 N 0.000
Bo9g166240 Brassica oleracea Bo9g166240 I 0.000
Bostr.2902s0137 Boechera stricta Bostr.2902s0137 I 0.000
Bostr.29827s0107 Boechera stricta Bostr.29827s0107 N 0.000
Bra008787 Brassica rapa Bra008787 I 0.000
Bra020571 Brassica rapa Bra020571 N 0.000
BRADI4G30920 Brachypodium distachyon BRADI4G30920 I 0.000
Cagra.1504s0017 Capsella grandiflora Cagra.1504s0017 I 0.000
Cagra.3166s0007 Capsella grandiflora Cagra.3166s0007 I 0.000
Carubv10002570m.g Capsella rubella Carubv10002570m.g I 0.000
Carubv10003685m.g Capsella rubella Carubv10003685m.g I 0.000
cassava44297.m1 Manihot esculenta cassava44297.m1 I 0.000
Ca_08116 Cicer arietinum Ca_08116 I 0.000
Ca_23376 Cicer arietinum Ca_23376 N 0.000
evm.TU.supercontig_51.84 Carica papaya evm.TU.supercontig_51.84 I 0.000
e_gw1.34.233.1 Physcomitrella patens e_gw1.34.233.1 I 0.000
F775_01070 Aegilops tauschii F775_01070 I 0.000
fgenesh2_kg.6__2677__AT5G27880.1 Arabidopsis lyrata fgenesh2_kg.6__2677__AT5G27880.1 N 0.000
GRMZM2G037574 Zea mays GRMZM2G037574 I 0.000
GRMZM2G108818 Zea mays GRMZM2G108818 I 0.000
LPERR09G07930 Leersia perrieri LPERR09G07930 I 0.000
MLOC_4507 Hordeum vulgare MLOC_4507 I 0.000
OB09G17800 Oryza brachyantha OB09G17800 I 0.000
OBART09G11250 Oryza barthii OBART09G11250 I 0.000
OGLUM09G11630 Oryza glumaepatula OGLUM09G11630 I 0.000
OLONG_006424 Oryza longistaminata OLONG_006424 I 0.000
OMERI09G08780 Oryza meridionalis OMERI09G08780 I 0.000
ONIVA09G10990 Oryza nivara ONIVA09G10990 I 0.000
OPUNC09G09720 Oryza punctata OPUNC09G09720 I 0.000
ORGLA09G0084000 Oryza glaberrima ORGLA09G0084000 I 0.000
ORUFI09G12050 Oryza rufipogon ORUFI09G12050 I 0.000
OS09G0431900 Oryza sativa OS09G0431900 I 0.000
Pavir.Bb02239 Panicum virgatum Pavir.Bb02239 I 0.000
Pavir.Ib01788 Panicum virgatum Pavir.Ib01788 I 0.000
Pavir.J36164 Panicum virgatum Pavir.J36164 I 0.000
SapurV1A.0052s0050 Salix purpurea SapurV1A.0052s0050 I 0.000
Sb02g025390 Sorghum bicolor Sb02g025390 I 0.000
SELMODRAFT_450832 Selaginella moellendorffii SELMODRAFT_450832 I 0.000
SELMODRAFT_450839 Selaginella moellendorffii SELMODRAFT_450839 I 0.000
Si031489m.g Setaria italica Si031489m.g I 0.000
Thhalv10015891m.g Eutrema salsugineum Thhalv10015891m.g I 0.000
Traes_5AL_81EFE5211 Triticum aestivum Traes_5AL_81EFE5211 I 0.000
Traes_5BL_3E6B0CD61 Triticum aestivum Traes_5BL_3E6B0CD61 I 0.000
Traes_5DL_B97546DA11 Triticum aestivum Traes_5DL_B97546DA11 I 0.000
TRIUR3_22340 Triticum urartu TRIUR3_22340 I 0.000
VIT_08s0040g00750 Vitis vinifera VIT_08s0040g00750 I 0.000