BGIOSGA004260 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA004260 T266750_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.693 0.835
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA004260-PA Myb 22 69
BGIOSGA004260-PA Myb 77 120

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS01G0695900 Oryza sativa OS01G0695900 I 0.909
OLONG_002608 Oryza longistaminata OLONG_002608 I 0.909
ORUFI01G30610 Oryza rufipogon ORUFI01G30610 I 0.909
ORGLA01G0227100 Oryza glaberrima ORGLA01G0227100 I 0.909
LPERR01G23630 Leersia perrieri LPERR01G23630 I 0.906
GSMUA_Achr10G14030_001 Musa acuminata GSMUA_Achr10G14030_001 I 0.801
GSMUA_Achr6G14840_001 Musa acuminata GSMUA_Achr6G14840_001 I 0.790
GSMUA_Achr5G06530_001 Musa acuminata GSMUA_Achr5G06530_001 I 0.790
MLOC_16037 Hordeum vulgare MLOC_16037 I 0.782
TRAES3BF026500080CFD_g Triticum aestivum TRAES3BF026500080CFD_g I 0.779
GSMUA_Achr7G13700_001 Musa acuminata GSMUA_Achr7G13700_001 I 0.772
BRADI2G47367 Brachypodium distachyon BRADI2G47367 I 0.771
GSMUA_Achr2G19380_001 Musa acuminata GSMUA_Achr2G19380_001 I 0.766
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I 0.765
Si004316m.g Setaria italica Si004316m.g I 0.765
Gorai.007G260600 Gossypium raimondii Gorai.007G260600 I 0.760
AMTR_s00068p00097220 Amborella trichopoda AMTR_s00068p00097220 I 0.755
AMTR_s00068p00092800 Amborella trichopoda AMTR_s00068p00092800 I 0.755
LjT20L14.140.nd Lotus japonicus LjT20L14.140.nd I 0.749
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.746
AMTR_s00068p00099460 Amborella trichopoda AMTR_s00068p00099460 I 0.744
TCM_024180 Theobroma cacao TCM_024180 I 0.735
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I 0.735
TCM_025910 Theobroma cacao TCM_025910 I 0.735
PK13689.1 Cannabis sativa PK13689.1 I 0.731
GLYMA13G09980 Glycine max GLYMA13G09980 I 0.730
Aquca_009_00496 Aquilegia coerulea Aquca_009_00496 I 0.730
GLYMA14G24500 Glycine max GLYMA14G24500 I 0.730
GRMZM2G395672 Zea mays GRMZM2G395672 I 0.727
VIT_06s0004g00570 Vitis vinifera VIT_06s0004g00570 I 0.723
Pavir.J31180 Panicum virgatum Pavir.J31180 I 0.717
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.711
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I 0.710
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.710
MTR_3g083540 Medicago truncatula MTR_3g083540 I 0.709
Bostr.3640s0147 Boechera stricta Bostr.3640s0147 I 0.706
Cagra.0690s0007 Capsella grandiflora Cagra.0690s0007 I 0.706
Carubv10014443m.g Capsella rubella Carubv10014443m.g I 0.706
MYB5 Arabidopsis thaliana AT3G13540 I 0.706
ATMYB5 Arabidopsis lyrata scaffold_301556.1 I 0.706
Thhalv10022057m.g Eutrema salsugineum Thhalv10022057m.g I 0.706
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.705
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.705
MDP0000723614 Malus domestica MDP0000723614 I 0.705
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.705
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.705
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.705
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.705
MDP0000655330 Malus domestica MDP0000655330 I 0.705
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.704
Bra039395 Brassica rapa Bra039395 I 0.703
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.702
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.702
cassava25868.m1 Manihot esculenta cassava25868.m1 I 0.702
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.702
Bo1g138250 Brassica oleracea Bo1g138250 I 0.701
evm.TU.supercontig_51.138 Carica papaya evm.TU.supercontig_51.138 I 0.699
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.698
mgf001865m Mimulus guttatus mgf001865m I 0.697
AMTR_s00068p00118480 Amborella trichopoda AMTR_s00068p00118480 I 0.697
POPTR_0013s05300 Populus trichocarpa POPTR_0013s05300 I 0.696
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I 0.696
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.696
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.696
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I 0.696
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.696
MDP0000791870 Malus domestica MDP0000791870 I 0.696
Lus10039173.g Linum usitatissimum Lus10039173.g I 0.694
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.693
POPTR_0019s05190 Populus trichocarpa POPTR_0019s05190 I 0.691
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I 0.691
POPTR_0019s05200 Populus trichocarpa POPTR_0019s05200 I 0.691
Lus10013762.g Linum usitatissimum Lus10013762.g I 0.690
Bra027423 Brassica rapa Bra027423 I 0.690
cassava27189.m1 Manihot esculenta cassava27189.m1 I 0.688
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.686
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.683
SapurV1A.0598s0010 Salix purpurea SapurV1A.0598s0010 I 0.680
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.678
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.678
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.673
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.673
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.672
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.672
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.672
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.672
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.672
MDP0000261265 Malus domestica MDP0000261265 I 0.672
Pm005577 Prunus mume Pm005577 I 0.672
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I 0.670
F775_19148 Aegilops tauschii F775_19148 I 0.670
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.670
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.670
TCM_037383 Theobroma cacao TCM_037383 I 0.669
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.667
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.667
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.666
MDP0000133817 Malus domestica MDP0000133817 I 0.665
MDP0000143276 Malus domestica MDP0000143276 I 0.665
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.661
TCM_029126 Theobroma cacao TCM_029126 N 0.661