BGIOSGA005283 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA005283 T266760_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.753 0.774
MYB27
M07097_2.00 		Arabidopsis thaliana
HHTACCTAAYTTWWN
NWWAARTTAGGTADD		 Dap-seq
OMalley et al.(2016)
MYB27_col_a 		0.682 0.720
MYB27
M07098_2.00 		Arabidopsis thaliana
NYHTACCTAAYTTWHN
NDWAARTTAGGTADRN		 Dap-seq
OMalley et al.(2016)
MYB27_colamp_a 		0.682 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA005283-PA Myb 58 105
BGIOSGA005283-PA Myb 111 156

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

251 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART01G45730 Oryza barthii OBART01G45730 I 0.909
ORGLA01G0394700 Oryza glaberrima ORGLA01G0394700 I 0.909
LPERR01G40120 Leersia perrieri LPERR01G40120 I 0.909
OPUNC01G44650 Oryza punctata OPUNC01G44650 I 0.909
ORUFI01G49220 Oryza rufipogon ORUFI01G49220 I 0.904
OB01G54920 Oryza brachyantha OB01G54920 I 0.881
GSMUA_Achr7G18200_001 Musa acuminata GSMUA_Achr7G18200_001 I 0.838
GSMUA_Achr6G15370_001 Musa acuminata GSMUA_Achr6G15370_001 I 0.833
BRADI2G62510 Brachypodium distachyon BRADI2G62510 I 0.831
GSMUA_Achr10G13520_001 Musa acuminata GSMUA_Achr10G13520_001 I 0.829
GSMUA_Achr5G28350_001 Musa acuminata GSMUA_Achr5G28350_001 I 0.815
TRAES3BF065400010CFD_g Triticum aestivum TRAES3BF065400010CFD_g I 0.792
F775_29427 Aegilops tauschii F775_29427 I 0.792
TRIUR3_22432 Triticum urartu TRIUR3_22432 I 0.792
Traes_3AL_A8AF980F3 Triticum aestivum Traes_3AL_A8AF980F3 I 0.792
GSMUA_Achr11G24690_001 Musa acuminata GSMUA_Achr11G24690_001 I 0.786
Si023104m.g Setaria italica Si023104m.g I 0.782
ORGLA12G0206100 Oryza glaberrima ORGLA12G0206100 I 0.782
F775_06315 Aegilops tauschii F775_06315 I 0.782
BGIOSGA035986 Oryza indica BGIOSGA035986 I 0.782
LPERR12G13390 Leersia perrieri LPERR12G13390 I 0.782
MLOC_52439 Hordeum vulgare MLOC_52439 I 0.782
ORGLA12G0141600 Oryza glaberrima ORGLA12G0141600 I 0.782
MYBAS2 Oryza sativa OS12G0567300 I 0.782
ORUFI12G17930 Oryza rufipogon ORUFI12G17930 I 0.782
GRMZM2G130149 Zea mays GRMZM2G130149 I 0.782
Pavir.J11500 Panicum virgatum Pavir.J11500 I 0.782
Sb08g018580 Sorghum bicolor Sb08g018580 I 0.782
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I 0.782
TRIUR3_16862 Triticum urartu TRIUR3_16862 I 0.782
OB12G23080 Oryza brachyantha OB12G23080 I 0.782
GRMZM2G047626 Zea mays GRMZM2G047626 I 0.782
MDP0000143156 Malus domestica MDP0000143156 I 0.778
MDP0000177010 Malus domestica MDP0000177010 I 0.778
Cla008413 Citrullus lanatus Cla008413 I 0.776
Cucsa.213500 Cucumis sativus Cucsa.213500 I 0.776
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.765
Pavir.Ca00653 Panicum virgatum Pavir.Ca00653 I 0.765
Pavir.J04129 Panicum virgatum Pavir.J04129 I 0.765
OB11G27690 Oryza brachyantha OB11G27690 I 0.763
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I 0.762
GSMUA_Achr10G26730_001 Musa acuminata GSMUA_Achr10G26730_001 I 0.759
OB05G11070 Oryza brachyantha OB05G11070 I 0.758
ONIVA05G01120 Oryza nivara ONIVA05G01120 I 0.758
OMERI05G01150 Oryza meridionalis OMERI05G01150 I 0.758
OLONG_004480 Oryza longistaminata OLONG_004480 I 0.758
OBART05G01080 Oryza barthii OBART05G01080 I 0.758
OGLUM05G01090 Oryza glumaepatula OGLUM05G01090 I 0.758
LPERR05G01030 Leersia perrieri LPERR05G01030 I 0.758
GSMUA_Achr2G16200_001 Musa acuminata GSMUA_Achr2G16200_001 I 0.758
ORUFI05G01110 Oryza rufipogon ORUFI05G01110 I 0.758
OPUNC05G00970 Oryza punctata OPUNC05G00970 I 0.758
BGIOSGA019054 Oryza indica BGIOSGA019054 I 0.758
Cucsa.379880 Cucumis sativus Cucsa.379880 I 0.757
Cla013488 Citrullus lanatus Cla013488 I 0.757
Pm000809 Prunus mume Pm000809 I 0.753
Carubv10017875m.g Capsella rubella Carubv10017875m.g I 0.753
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I 0.753
ATMYB48 Arabidopsis thaliana AT3G46130 I 0.753
Bra018223 Brassica rapa Bra018223 I 0.753
TCM_041904 Theobroma cacao TCM_041904 I 0.753
Bo3g130340 Brassica oleracea Bo3g130340 I 0.753
MYB59 Arabidopsis thaliana AT5G59780 D 0.753
PRUPE_ppa015954mg Prunus persica PRUPE_ppa015954mg I 0.753
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I 0.753
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I 0.753
SapurV1A.0008s0950 Salix purpurea SapurV1A.0008s0950 I 0.753
ATMYB48-1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001097 I 0.753
MYB59 Arabidopsis lyrata fgenesh2_kg.8__1928__AT5G59780.3 I 0.753
BRADI2G37377 Brachypodium distachyon BRADI2G37377 I 0.752
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.751
GLYMA15G04620 Glycine max GLYMA15G04620 I 0.750
GLYMA13G40830 Glycine max GLYMA13G40830 I 0.750
POPTR_0001s24220 Populus trichocarpa POPTR_0001s24220 I 0.750
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I 0.750
GSMUA_Achr8G02640_001 Musa acuminata GSMUA_Achr8G02640_001 I 0.749
Si024470m.g Setaria italica Si024470m.g I 0.749
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I 0.749
Pavir.J36591 Panicum virgatum Pavir.J36591 I 0.749
VIT_06s0004g04140 Vitis vinifera VIT_06s0004g04140 I 0.748
AMTR_s00145p00098450 Amborella trichopoda AMTR_s00145p00098450 I 0.748
Lus10005886.g Linum usitatissimum Lus10005886.g I 0.747
Si022826m.g Setaria italica Si022826m.g I 0.747
Sb09g001590 Sorghum bicolor Sb09g001590 I 0.746
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.746
GSMUA_Achr10G03710_001 Musa acuminata GSMUA_Achr10G03710_001 I 0.744
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I 0.742
MTR_2g096380 Medicago truncatula MTR_2g096380 I 0.742
Ca_02593 Cicer arietinum Ca_02593 I 0.742
29788.m000340 Ricinus communis 29788.m000340 I 0.741
cassava13589.valid.m1 Manihot esculenta cassava13589.valid.m1 I 0.741
Solyc11g073120.1 Solanum lycopersicum Solyc11g073120.1 I 0.741
PGSC0003DMG400015536 Solanum tuberosum PGSC0003DMG400015536 I 0.741
Traes_1DS_47E2D90AC Triticum aestivum Traes_1DS_47E2D90AC I 0.738
F775_14172 Aegilops tauschii F775_14172 I 0.738
Traes_1BS_B44ECE28C Triticum aestivum Traes_1BS_B44ECE28C I 0.738
Traes_1DS_47E2D90AC1 Triticum aestivum Traes_1DS_47E2D90AC1 I 0.738
GSMUA_Achr9G28370_001 Musa acuminata GSMUA_Achr9G28370_001 I 0.738
Gorai.003G136400 Gossypium raimondii Gorai.003G136400 I 0.736
evm.TU.supercontig_190.35 Carica papaya evm.TU.supercontig_190.35 I 0.736
GRMZM2G013581 Zea mays GRMZM2G013581 N 0.732
Solyc06g005330.2 Solanum lycopersicum Solyc06g005330.2 I 0.730
GSMUA_Achr8G34340_001 Musa acuminata GSMUA_Achr8G34340_001 I 0.729
mgf020363m Mimulus guttatus mgf020363m I 0.728
mgf025691m Mimulus guttatus mgf025691m I 0.728
Bo7g033260 Brassica oleracea Bo7g033260 I 0.724
Bra015029 Brassica rapa Bra015029 I 0.724
Bo2g025410 Brassica oleracea Bo2g025410 I 0.723
Pavir.J08441 Panicum virgatum Pavir.J08441 I 0.723
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I 0.723
Bra020289 Brassica rapa Bra020289 I 0.723
Si026803m.g Setaria italica Si026803m.g I 0.723
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I 0.720
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I 0.720
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I 0.720
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I 0.720
Carubv10014367m.g Capsella rubella Carubv10014367m.g I 0.720
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I 0.720
mgf004640m Mimulus guttatus mgf004640m I 0.720
POPTR_0009s03240 Populus trichocarpa POPTR_0009s03240 I 0.720
MYB305 Arabidopsis thaliana AT3G24310 I 0.720
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I 0.720
Bo1g098860 Brassica oleracea Bo1g098860 I 0.720
Bo3g083130 Brassica oleracea Bo3g083130 I 0.720
Bra028369 Brassica rapa Bra028369 I 0.720
Bra001941 Brassica rapa Bra001941 I 0.720
F775_28589 Aegilops tauschii F775_28589 I 0.718
ORGLA11G0187400 Oryza glaberrima ORGLA11G0187400 I 0.718
BGIOSGA033532 Oryza indica BGIOSGA033532 I 0.718
TRIUR3_16687 Triticum urartu TRIUR3_16687 I 0.718
Traes_4BS_61B30E3E4 Triticum aestivum Traes_4BS_61B30E3E4 I 0.718
Traes_4DS_0ECE7A421 Triticum aestivum Traes_4DS_0ECE7A421 I 0.718
ORUFI11G25190 Oryza rufipogon ORUFI11G25190 I 0.718
MLOC_78504 Hordeum vulgare MLOC_78504 I 0.718
MYBAS1 Oryza sativa OS11G0700500 I 0.718
GRMZM2G048136 Zea mays GRMZM2G048136 I 0.715
Bra006694 Brassica rapa Bra006694 I 0.714
Bra002533 Brassica rapa Bra002533 I 0.710
Traes_4AL_8B52D54FD Triticum aestivum Traes_4AL_8B52D54FD I 0.710
AtMYB27 Vitis vinifera VIT_08s0007g04830 I 0.707
orange1.1g044161m.g Citrus sinensis orange1.1g044161m.g I 0.705
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I 0.705
Thhalv10010915m.g Eutrema salsugineum Thhalv10010915m.g I 0.705
GLYMA12G07110 Glycine max GLYMA12G07110 I 0.703
Cagra.0612s0043 Capsella grandiflora Cagra.0612s0043 I 0.703
GLYMA11G15180 Glycine max GLYMA11G15180 I 0.703
Bostr.9544s0002 Boechera stricta Bostr.9544s0002 I 0.703
Carubv10019409m.g Capsella rubella Carubv10019409m.g I 0.703
AtMYB27 Arabidopsis lyrata fgenesh2_kg.5__1687__AT3G53200.1 I 0.701
Gorai.009G413600 Gossypium raimondii Gorai.009G413600 I 0.700
AMTR_s01267p00006490 Amborella trichopoda AMTR_s01267p00006490 I 0.699
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I 0.699
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I 0.699
GLYMA18G50881 Glycine max GLYMA18G50881 I 0.696
Pavir.J11826 Panicum virgatum Pavir.J11826 I 0.696
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I 0.696
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I 0.695
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I 0.694
Pavir.J33560 Panicum virgatum Pavir.J33560 I 0.693
GLYMA17G17560 Glycine max GLYMA17G17560 I 0.693
GLYMA10G26681 Glycine max GLYMA10G26681 I 0.693
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I 0.693
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I 0.690
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I 0.690
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I 0.690
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I 0.690
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I 0.690
Cagra.15509s0001 Capsella grandiflora Cagra.15509s0001 I 0.690
Carubv10007255m.g Capsella rubella Carubv10007255m.g I 0.690
Bostr.2021s0106 Boechera stricta Bostr.2021s0106 I 0.690
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I 0.690
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I 0.690
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I 0.690
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I 0.690
MTR_1g045610 Medicago truncatula MTR_1g045610 I 0.690
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I 0.690
Pm009050 Prunus mume Pm009050 I 0.690
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I 0.690
fgenesh2_kg.9__1__AT4G13480.1 Arabidopsis lyrata fgenesh2_kg.9__1__AT4G13480.1 I 0.689
AtMYB79 Arabidopsis thaliana AT4G13480 I 0.689
evm.TU.supercontig_92.99 Carica papaya evm.TU.supercontig_92.99 I 0.686
Bra028550 Brassica rapa Bra028550 I 0.685
Lus10023711.g Linum usitatissimum Lus10023711.g I 0.685
MYB27 Arabidopsis thaliana AT3G53200 D 0.682
Bo6g067190 Brassica oleracea Bo6g067190 I 0.681
Bo9g140750 Brassica oleracea Bo9g140750 I 0.680
PK10274.1 Cannabis sativa PK10274.1 I 0.680
Aquca_030_00038 Aquilegia coerulea Aquca_030_00038 I 0.680
GSMUA_Achr1G03450_001 Musa acuminata GSMUA_Achr1G03450_001 I 0.680
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.679
Bo8g082570 Brassica oleracea Bo8g082570 I 0.678
Bra006977 Brassica rapa Bra006977 I 0.678
GRMZM2G070849 Zea mays GRMZM2G070849 I 0.677
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.677
GLYMA20G20980 Glycine max GLYMA20G20980 I 0.676
TCM_018971 Theobroma cacao TCM_018971 I 0.675
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.675
Cla018062 Citrullus lanatus Cla018062 N 0.675
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.675
Si010822m.g Setaria italica Si010822m.g I 0.675
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.674
GSMUA_Achr10G19840_001 Musa acuminata GSMUA_Achr10G19840_001 I 0.674
MTR_1g062940 Medicago truncatula MTR_1g062940 N 0.674
Eucgr.B03006 Eucalyptus grandis Eucgr.B03006 I 0.673
Pm015392 Prunus mume Pm015392 I 0.673
MDP0000183451 Malus domestica MDP0000183451 I 0.672
MDP0000133412 Malus domestica MDP0000133412 I 0.672
Ca_07872 Cicer arietinum Ca_07872 I 0.670
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I 0.670
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I 0.670
gene25149-v1.0-hybrid Fragaria vesca gene25149-v1.0-hybrid I 0.669
Eucgr.A01648 Eucalyptus grandis Eucgr.A01648 I 0.669
BGIOSGA006030 Oryza indica BGIOSGA006030 I 0.668
Pavir.Aa01294 Panicum virgatum Pavir.Aa01294 I 0.668
Pavir.J37992 Panicum virgatum Pavir.J37992 I 0.668
Aquca_041_00011 Aquilegia coerulea Aquca_041_00011 I 0.668
Sb04g026210 Sorghum bicolor Sb04g026210 I 0.668
OB02G31640 Oryza brachyantha OB02G31640 I 0.668
ORGLA02G0210000 Oryza glaberrima ORGLA02G0210000 I 0.668
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I 0.668
OBART02G24300 Oryza barthii OBART02G24300 I 0.668
OGLUM02G24660 Oryza glumaepatula OGLUM02G24660 I 0.668
OPUNC02G22200 Oryza punctata OPUNC02G22200 I 0.668
ONIVA09G12460 Oryza nivara ONIVA09G12460 I 0.668
OMERI02G23750 Oryza meridionalis OMERI02G23750 I 0.668
Si018007m.g Setaria italica Si018007m.g I 0.668
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I 0.668
OS02G0618400 Oryza sativa OS02G0618400 I 0.668
GRMZM2G027697 Zea mays GRMZM2G027697 I 0.668
ORUFI02G25650 Oryza rufipogon ORUFI02G25650 I 0.668
GRMZM2G043792 Zea mays GRMZM2G043792 I 0.668
TCM_022293 Theobroma cacao TCM_022293 I 0.667
Lus10034372.g Linum usitatissimum Lus10034372.g I 0.667
ORGLA04G0153500 Oryza glaberrima ORGLA04G0153500 I 0.666
BGIOSGA014750 Oryza indica BGIOSGA014750 I 0.666
OB04G25360 Oryza brachyantha OB04G25360 I 0.666
Thhalv10005370m.g Eutrema salsugineum Thhalv10005370m.g I 0.666
OS04G0508500 Oryza sativa OS04G0508500 I 0.666
ORUFI04G19690 Oryza rufipogon ORUFI04G19690 I 0.666
Pavir.Ga01308 Panicum virgatum Pavir.Ga01308 I 0.666
LPERR04G14700 Leersia perrieri LPERR04G14700 I 0.666
Traes_6BL_8E4A831B6 Triticum aestivum Traes_6BL_8E4A831B6 I 0.665
Lus10014453.g Linum usitatissimum Lus10014453.g I 0.665
MLOC_6786 Hordeum vulgare MLOC_6786 I 0.665
Bo7g050560 Brassica oleracea Bo7g050560 I 0.664
Bra012482 Brassica rapa Bra012482 I 0.664
Lus10005079.g Linum usitatissimum Lus10005079.g I 0.664
F775_06959 Aegilops tauschii F775_06959 I 0.663
TRIUR3_18020 Triticum urartu TRIUR3_18020 I 0.663
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I 0.663
Traes_2AL_605C25CDF Triticum aestivum Traes_2AL_605C25CDF I 0.663