Bo15369s010 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo15369s010 T267054_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CDC5
M02698_2.00
Arabidopsis thaliana
NVCGCTGAGBN

NVCTCAGCGBN
SELEX
Mathelier et al.(2014)
MA0579.1
0.722 0.895
CDC5
M11037_2.00
Arabidopsis thaliana
NVCGCTGAGBN

NVCTCAGCGBN
Transfac
Matys et al.(2006)
P$CDC5_01
0.722 0.895
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo15369s010.1 Myb 7 53
Bo15369s010.1 Myb 59 97

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG004972.1 Alligator sinensis Alligator_sinensis_CCG004972.1 I 0.000
Arid2 Mus musculus ENSMUSG00000033237 I 0.000
Cla007529 Citrullus lanatus Cla007529 I 0.000
Cla016376 Citrullus lanatus Cla016376 I 0.000
Cmyd_10012612 Chelonia mydas Cmyd_10012612 I 0.000
Contig1044.0.g66 Oxytricha trifallax Contig1044.0.g66 I 0.000
DDB_G0275333 Dictyostelium discoideum DDB_G0275333 D 0.000
EFA85631.1 Polysphondylium pallidum EFA85631.1 I 0.000
estExt_fgenesh1_pg.C_10228 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_10228 I 0.000
GG.C169_S01_00460 Chlorella vulgaris GG.C169_S01_00460 I 0.000
GSPATT00004674001 Paramecium tetraurelia GSPATT00004674001 D 0.000
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.000
Sakowv30017861m.g Saccoglossus kowalevskii Sakowv30017861m.g I 0.000
Sakowv30024151m.g Saccoglossus kowalevskii Sakowv30024151m.g N 0.000
SPU_005718 Strongylocentrotus purpuratus SPU_005718 I 0.000
SPU_017106 Strongylocentrotus purpuratus SPU_017106 I 0.000
SPU_025601 Strongylocentrotus purpuratus SPU_025601 I 0.000
TTHERM_00243900 Tetrahymena thermophila TTHERM_00243900 D 0.000
XP_002160328.1 Hydra magnipapillata XP_002160328.1 I 0.000