Bo1g006820 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo1g006820 T267059_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.768 0.882
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.768 0.882
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.755 0.860
MYB51
M07010_2.00
Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW

WRGTWGGTRRRNNNDNDDNDN
Dap-seq
OMalley et al.(2016)
MYB51_col_a
0.672 0.731
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN

NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.664 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g006820.1 Myb 14 61
Bo1g006820.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

478 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CPAG_01875 Candida parapsilosis CPAG_01875 N 0.000
PICST_32563 Scheffersomyces stipitis PICST_32563 N 0.000
PGUG_01067 Meyerozyma guilliermondii PGUG_01067 N 0.000
LELG_00816 Lodderomyces elongisporus LELG_00816 N 0.000
GNLVRS01_PISO0N06349g Millerozyma farinosa GNLVRS01_PISO0N06349g N 0.000
GNLVRS01_PISO0M06194g Millerozyma farinosa GNLVRS01_PISO0M06194g N 0.000
G210_4260 Candida maltosa G210_4260 N 0.000
DEHA2F25322g Debaryomyces hansenii DEHA2F25322g N 0.000
CTRG_04183 Candida tropicalis CTRG_04183 N 0.000
CORT_0A08070 Candida orthopsilosis CORT_0A08070 N 0.000
CD36_06560 Candida dubliniensis CD36_06560 N 0.000
CaO19.6203 Candida albicans CaO19.6203 N 0.000
CaO19.13584 Candida albicans CaO19.13584 N 0.000
CANTEDRAFT_111556 Candida tenuis CANTEDRAFT_111556 N 0.000
PGUG_01067 Candida guilliermondii PGUG_01067 N 0.000
SPAPADRAFT_131412 Spathaspora passalidarum SPAPADRAFT_131412 N 0.000