Bo1g141480 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo1g141480 T267110_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G05090
M02305_2.00 		Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN		 PBM
Weirauch et al.(2014)
pTH7104 		0.822 0.952
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g141480.1 Myb 50 95

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_7g089010 Medicago truncatula MTR_7g089010 I 0.822
Pm031149 Prunus mume Pm031149 I 0.822
evm.TU.supercontig_92.70 Carica papaya evm.TU.supercontig_92.70 I 0.822
gene17673-v1.0-hybrid Fragaria vesca gene17673-v1.0-hybrid I 0.822
Eucgr.K01670 Eucalyptus grandis Eucgr.K01670 I 0.822
Eucgr.A02201 Eucalyptus grandis Eucgr.A02201 I 0.822
ONIVA05G17050 Oryza nivara ONIVA05G17050 I 0.822
OMERI05G06680 Oryza meridionalis OMERI05G06680 I 0.822
Ciclev10012203m.g Citrus clementina Ciclev10012203m.g I 0.822
MLOC_24056 Hordeum vulgare MLOC_24056 I 0.822
LPERR05G13030 Leersia perrieri LPERR05G13030 I 0.822
GRMZM2G398055 Zea mays GRMZM2G398055 I 0.822
Gorai.007G351500 Gossypium raimondii Gorai.007G351500 I 0.822
Cucsa.358530 Cucumis sativus Cucsa.358530 I 0.822
GSMUA_Achr11G14170_001 Musa acuminata GSMUA_Achr11G14170_001 I 0.822
Solyc10g078310.1 Solanum lycopersicum Solyc10g078310.1 I 0.822
GSMUA_Achr8G05880_001 Musa acuminata GSMUA_Achr8G05880_001 I 0.822
GSMUA_Achr5G27500_001 Musa acuminata GSMUA_Achr5G27500_001 I 0.822
Gorai.002G230800 Gossypium raimondii Gorai.002G230800 I 0.822
Carubv10024859m.g Capsella rubella Carubv10024859m.g I 0.822
mgf014801m Mimulus guttatus mgf014801m I 0.822
scaffold_301238.1 Arabidopsis lyrata scaffold_301238.1 I 0.822
Bostr.27991s0013 Boechera stricta Bostr.27991s0013 I 0.822
PRUPE_ppa026577mg Prunus persica PRUPE_ppa026577mg I 0.822
MYBC1 Arabidopsis lyrata scaffold_402901.1 I 0.822
scaffold_600469.1 Arabidopsis lyrata scaffold_600469.1 I 0.822
Aquca_009_00074 Aquilegia coerulea Aquca_009_00074 I 0.822
Bostr.13129s0456 Boechera stricta Bostr.13129s0456 I 0.822
Bostr.19424s0999 Boechera stricta Bostr.19424s0999 I 0.822
Bostr.9345s0035 Boechera stricta Bostr.9345s0035 I 0.822
Cagra.0834s0003 Capsella grandiflora Cagra.0834s0003 I 0.822
ORGLA05G0141400 Oryza glaberrima ORGLA05G0141400 I 0.822
Carubv10014134m.g Capsella rubella Carubv10014134m.g I 0.822
OPUNC05G14480 Oryza punctata OPUNC05G14480 I 0.822
Carubv10003130m.g Capsella rubella Carubv10003130m.g I 0.822
Cagra.1642s0062 Capsella grandiflora Cagra.1642s0062 I 0.822
PGSC0003DMG400007174 Solanum tuberosum PGSC0003DMG400007174 I 0.822
Cagra.1504s0014 Capsella grandiflora Cagra.1504s0014 I 0.822
OS05G0412000 Oryza sativa OS05G0412000 I 0.822
Lus10010442.g Linum usitatissimum Lus10010442.g I 0.822
GSMUA_Achr2G01920_001 Musa acuminata GSMUA_Achr2G01920_001 I 0.822
Bo5g137150 Brassica oleracea Bo5g137150 I 0.822
Bo5g019990 Brassica oleracea Bo5g019990 I 0.822
Bo4g012890 Brassica oleracea Bo4g012890 I 0.822
Thhalv10014387m.g Eutrema salsugineum Thhalv10014387m.g I 0.822
Bo9g177390 Brassica oleracea Bo9g177390 I 0.822
Bra004593 Brassica rapa Bra004593 I 0.822
GLYMA19G30700 Glycine max GLYMA19G30700 I 0.822
Bra009087 Brassica rapa Bra009087 I 0.822
Bra005837 Brassica rapa Bra005837 I 0.822
Bo3g003150 Brassica oleracea Bo3g003150 I 0.822
Thhalv10017945m.g Eutrema salsugineum Thhalv10017945m.g I 0.822
AT3G10760 Arabidopsis thaliana AT3G10760 I 0.822
MYBC1 Arabidopsis thaliana AT2G40970 I 0.822
chr1.CM0269.130.nd Lotus japonicus chr1.CM0269.130.nd I 0.822
PK23977.1 Cannabis sativa PK23977.1 I 0.822
AT5G05090 Arabidopsis thaliana AT5G05090 D 0.822
BGIOSGA018058 Oryza indica BGIOSGA018058 I 0.822
Thhalv10021133m.g Eutrema salsugineum Thhalv10021133m.g I 0.822
30180.m001019 Ricinus communis 30180.m001019 I 0.822
Bra034144 Brassica rapa Bra034144 I 0.822
Cla017714 Citrullus lanatus Cla017714 I 0.822
VIT_08s0040g00900 Vitis vinifera VIT_08s0040g00900 I 0.822
Ca_07144 Cicer arietinum Ca_07144 I 0.822
Lus10012102.g Linum usitatissimum Lus10012102.g I 0.822
orange1.1g020690m.g Citrus sinensis orange1.1g020690m.g I 0.822
Lus10038996.g Linum usitatissimum Lus10038996.g I 0.822
MDP0000846313 Malus domestica MDP0000846313 I 0.822
Lus10027291.g Linum usitatissimum Lus10027291.g I 0.822
Cucsa.140020 Cucumis sativus Cucsa.140020 I 0.822
BRADI2G25380 Brachypodium distachyon BRADI2G25380 I 0.822
GLYMA02G21820 Glycine max GLYMA02G21820 I 0.822
Cla012286 Citrullus lanatus Cla012286 I 0.822
GLYMA03G27890 Glycine max GLYMA03G27890 I 0.822
cassava20582.m1 Manihot esculenta cassava20582.m1 I 0.822
Sb09g020340 Sorghum bicolor Sb09g020340 I 0.819
TCM_045790 Theobroma cacao TCM_045790 I 0.804
Bra029866 Brassica rapa Bra029866 I 0.801
POPTR_0016s03240 Populus trichocarpa POPTR_0016s03240 I 0.783
AMTR_s00101p00128190 Amborella trichopoda AMTR_s00101p00128190 I 0.783
SELMODRAFT_36646 Selaginella moellendorffii SELMODRAFT_36646 I 0.783
gw1.104.128.1 Physcomitrella patens gw1.104.128.1 I 0.783
Carubv10024931m.g Capsella rubella Carubv10024931m.g I 0.783
SapurV1A.0159s0180 Salix purpurea SapurV1A.0159s0180 I 0.783
gw1.29.165.1 Physcomitrella patens gw1.29.165.1 I 0.783
POPTR_0006s03340 Populus trichocarpa POPTR_0006s03340 I 0.783
SapurV1A.1916s0020 Salix purpurea SapurV1A.1916s0020 I 0.783
EuGene.0600010100 Micromonas sp RCC299 EuGene.0600010100 I 0.783
gw1.29.164.1 Physcomitrella patens gw1.29.164.1 I 0.783
gw1.27.80.1 Physcomitrella patens gw1.27.80.1 I 0.783
Cagra.0995s0002 Capsella grandiflora Cagra.0995s0002 I 0.783
GSMUA_Achr10G12590_001 Musa acuminata GSMUA_Achr10G12590_001 I 0.768
EuGene.0000090108 Micromonas pusilla EuGene.0000090108 I 0.768
Solyc10g080960.1 Solanum lycopersicum Solyc10g080960.1 I 0.762
PGSC0003DMG400028100 Solanum tuberosum PGSC0003DMG400028100 I 0.762
GRMZM2G471600 Zea mays GRMZM2G471600 I 0.762
Cucsa.117700 Cucumis sativus Cucsa.117700 I 0.740
Aquca_003_00124 Aquilegia coerulea Aquca_003_00124 I 0.740
evm.TU.supercontig_81.106 Carica papaya evm.TU.supercontig_81.106 I 0.740
Pavir.Ba03246 Panicum virgatum Pavir.Ba03246 I 0.740
orange1.1g047187m.g Citrus sinensis orange1.1g047187m.g I 0.740
MDP0000672486 Malus domestica MDP0000672486 I 0.740
Pavir.Ea04181 Panicum virgatum Pavir.Ea04181 I 0.740
Pavir.Eb04079 Panicum virgatum Pavir.Eb04079 I 0.740
PK05290.1 Cannabis sativa PK05290.1 I 0.740
Thhalv10002605m.g Eutrema salsugineum Thhalv10002605m.g I 0.740
SapurV1A.0128s0090 Salix purpurea SapurV1A.0128s0090 I 0.740
Gorai.009G097100 Gossypium raimondii Gorai.009G097100 I 0.740
Gorai.003G129100 Gossypium raimondii Gorai.003G129100 I 0.740
Carubv10017603m.g Capsella rubella Carubv10017603m.g I 0.740
Cagra.0448s0013 Capsella grandiflora Cagra.0448s0013 I 0.740
Bostr.26833s0280 Boechera stricta Bostr.26833s0280 I 0.740
Ciclev10028658m.g Citrus clementina Ciclev10028658m.g I 0.740
Eucgr.B02313 Eucalyptus grandis Eucgr.B02313 I 0.740
Gorai.001G112200 Gossypium raimondii Gorai.001G112200 I 0.740
gene30204-v1.0-hybrid Fragaria vesca gene30204-v1.0-hybrid I 0.740
Bostr.18473s0293 Boechera stricta Bostr.18473s0293 I 0.740
TCM_041791 Theobroma cacao TCM_041791 I 0.740
PRUPE_ppa008837mg Prunus persica PRUPE_ppa008837mg I 0.740
POPTR_0009s03990 Populus trichocarpa POPTR_0009s03990 I 0.740
GSMUA_Achr10G02420_001 Musa acuminata GSMUA_Achr10G02420_001 I 0.740
MLOC_37446 Hordeum vulgare MLOC_37446 I 0.740
Si002653m.g Setaria italica Si002653m.g I 0.740
Solyc06g005680.2 Solanum lycopersicum Solyc06g005680.2 I 0.740
Bra033809 Brassica rapa Bra033809 I 0.740
PGSC0003DMG400002144 Solanum tuberosum PGSC0003DMG400002144 I 0.740
GSMUA_Achr5G07060_001 Musa acuminata GSMUA_Achr5G07060_001 I 0.740
MTR_4g064730 Medicago truncatula MTR_4g064730 I 0.740
GLYMA11G14490 Glycine max GLYMA11G14490 I 0.740
fgenesh2_kg.8__1908__AT5G59570.1 Arabidopsis lyrata fgenesh2_kg.8__1908__AT5G59570.1 I 0.740
PCL1 Arabidopsis lyrata fgenesh2_kg.5__1030__AT3G46640.2 I 0.740
GLYMA12G06406 Glycine max GLYMA12G06406 I 0.740
BRADI2G62067 Brachypodium distachyon BRADI2G62067 I 0.740
AMTR_s00012p00251530 Amborella trichopoda AMTR_s00012p00251530 I 0.740
Sb03g047330 Sorghum bicolor Sb03g047330 I 0.740
Bo1g070860 Brassica oleracea Bo1g070860 I 0.740
Ca_16282 Cicer arietinum Ca_16282 I 0.740
BOA Arabidopsis thaliana AT5G59570 I 0.740
VIT_06s0004g05120 Vitis vinifera VIT_06s0004g05120 I 0.740
PCL1 Arabidopsis thaliana AT3G46640 I 0.740
Bo3g132770 Brassica oleracea Bo3g132770 I 0.740
Pm000693 Prunus mume Pm000693 I 0.740
TRAES3BF076800040CFD_g Triticum aestivum TRAES3BF076800040CFD_g I 0.740
Cla008353 Citrullus lanatus Cla008353 I 0.740
Bra018204 Brassica rapa Bra018204 I 0.740
Cagra.1317s0057 Capsella grandiflora Cagra.1317s0057 I 0.738
Carubv10026895m.g Capsella rubella Carubv10026895m.g I 0.738
Solyc06g076350.2 Solanum lycopersicum Solyc06g076350.2 I 0.734
GSMUA_AchrUn_randomG18750_001 Musa acuminata GSMUA_AchrUn_randomG18750_001 I 0.734
PGSC0003DMG400030328 Solanum tuberosum PGSC0003DMG400030328 I 0.734
GRMZM2G067702 Zea mays GRMZM2G067702 I 0.732
Aquca_009_00923 Aquilegia coerulea Aquca_009_00923 I 0.725
estExt_fgenesh2_pg.C_Chr_120081 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_120081 I 0.724
SapurV1A.0041s0350 Salix purpurea SapurV1A.0041s0350 I 0.722
MDP0000669078 Malus domestica MDP0000669078 I 0.722
est_orfs.10_1861_4270447:1 Micromonas pusilla est_orfs.10_1861_4270447:1 I 0.709
Bra026635 Brassica rapa Bra026635 I 0.687
Ciclev10004989m.g Citrus clementina Ciclev10004989m.g I 0.683
cassava19434.valid.m1 Manihot esculenta cassava19434.valid.m1 I 0.680
cassava34353.m1 Manihot esculenta cassava34353.m1 I 0.680
29751.m001898 Ricinus communis 29751.m001898 I 0.680
F775_08927 Aegilops tauschii F775_08927 I 0.679
OLONG_001321 Oryza longistaminata OLONG_001321 I 0.679
MLOC_24962 Hordeum vulgare MLOC_24962 I 0.679
SapurV1A.0015s0530 Salix purpurea SapurV1A.0015s0530 I 0.675
GRMZM2G099797 Zea mays GRMZM2G099797 I 0.675
RR21 Oryza indica BGIOSGA012149 I 0.675
Pavir.Ib00921 Panicum virgatum Pavir.Ib00921 I 0.675
Pavir.Ia04946 Panicum virgatum Pavir.Ia04946 I 0.675
BRADI1G69480 Brachypodium distachyon BRADI1G69480 I 0.675
F775_32153 Aegilops tauschii F775_32153 I 0.675
OGLUM03G09080 Oryza glumaepatula OGLUM03G09080 I 0.675
Sb01g042400 Sorghum bicolor Sb01g042400 I 0.675
POPTR_0008s13490 Populus trichocarpa POPTR_0008s13490 I 0.675
ORUFI03G09090 Oryza rufipogon ORUFI03G09090 I 0.675
ORGLA03G0086800 Oryza glaberrima ORGLA03G0086800 I 0.675
Si034517m.g Setaria italica Si034517m.g I 0.675
Traes_4AS_6486B493A Triticum aestivum Traes_4AS_6486B493A I 0.675
TRIUR3_25342 Triticum urartu TRIUR3_25342 I 0.675
Traes_4DL_2527CA8BF Triticum aestivum Traes_4DL_2527CA8BF I 0.675
Traes_4BL_941E7DE4D Triticum aestivum Traes_4BL_941E7DE4D I 0.675
OPUNC03G08640 Oryza punctata OPUNC03G08640 I 0.675
RR21 Oryza sativa OS03G0224200 I 0.675
OBART03G08950 Oryza barthii OBART03G08950 I 0.675
LPERR03G08040 Leersia perrieri LPERR03G08040 I 0.675
GRMZM2G126834 Zea mays GRMZM2G126834 I 0.675
OLONG_002370 Oryza longistaminata OLONG_002370 I 0.675
OB03G19140 Oryza brachyantha OB03G19140 I 0.675
ONIVA06G01160 Oryza nivara ONIVA06G01160 I 0.675
OMERI03G08390 Oryza meridionalis OMERI03G08390 I 0.675
Thhalv10004402m.g Eutrema salsugineum Thhalv10004402m.g I 0.674
PK02601.1 Cannabis sativa PK02601.1 I 0.671
Traes_6DL_D1C9CE275 Triticum aestivum Traes_6DL_D1C9CE275 I 0.671
Traes_6BL_790C095EE Triticum aestivum Traes_6BL_790C095EE I 0.671
MLOC_76165 Hordeum vulgare MLOC_76165 I 0.671
BRADI3G54120 Brachypodium distachyon BRADI3G54120 I 0.671
BRADI1G47400 Brachypodium distachyon BRADI1G47400 I 0.671
fgeneshCV_pg.C_scaffold_15000185 Chlorella vulgaris fgeneshCV_pg.C_scaffold_15000185 I 0.669
gw1.15.242.1 Coccomyxa subellipsoidea C169 gw1.15.242.1 I 0.669
CHLREDRAFT_111844 Chlamydomonas reinhardtii CHLREDRAFT_111844 I 0.667
gw1.37.160.1 Volvox carteri gw1.37.160.1 I 0.667
AMTR_s00019p00208460 Amborella trichopoda AMTR_s00019p00208460 I 0.665