Bo2g161170 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo2g161170 T267190_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB51
M07010_2.00
Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW

WRGTWGGTRRRNNNDNDDNDN
Dap-seq
OMalley et al.(2016)
MYB51_col_a
0.708 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g161170.1 Myb 14 61
Bo2g161170.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra029350 Brassica rapa Bra029350 I 0.885
ATMYB34 Arabidopsis lyrata fgenesh2_kg.8__2056__AT5G60890.1 I 0.845
MYB34 Arabidopsis thaliana AT5G60890 I 0.845
Carubv10027524m.g Capsella rubella Carubv10027524m.g I 0.841
Thhalv10004638m.g Eutrema salsugineum Thhalv10004638m.g I 0.836
Bra013000 Brassica rapa Bra013000 I 0.836
Bo7g098110 Brassica oleracea Bo7g098110 I 0.833
Bo2g161180 Brassica oleracea Bo2g161180 I 0.821
Bostr.26833s0149 Boechera stricta Bostr.26833s0149 I 0.811
Bra029349 Brassica rapa Bra029349 I 0.796
Bo9g014380 Brassica oleracea Bo9g014380 I 0.789
Bra035954 Brassica rapa Bra035954 I 0.780
Bra031035 Brassica rapa Bra031035 I 0.725
Bo8g104300 Brassica oleracea Bo8g104300 I 0.725
Bo8g067910 Brassica oleracea Bo8g067910 I 0.724
Bra016553 Brassica rapa Bra016553 I 0.724
Thhalv10008152m.g Eutrema salsugineum Thhalv10008152m.g I 0.711
Bo5g025570 Brassica oleracea Bo5g025570 I 0.711
Bra025666 Brassica rapa Bra025666 I 0.711
Cagra.4153s0023 Capsella grandiflora Cagra.4153s0023 I 0.708
MYB51 Arabidopsis thaliana AT1G18570 D 0.708
Carubv10009563m.g Capsella rubella Carubv10009563m.g I 0.708
Bostr.7128s0464 Boechera stricta Bostr.7128s0464 I 0.708
MYB51 Arabidopsis lyrata fgenesh2_kg.1__2031__AT1G18570.1 I 0.708
Thhalv10018705m.g Eutrema salsugineum Thhalv10018705m.g I 0.698
Bo2g080900 Brassica oleracea Bo2g080900 I 0.693
PK14811.1 Cannabis sativa PK14811.1 I 0.686
Bra008131 Brassica rapa Bra008131 I 0.683
PK01174.1 Cannabis sativa PK01174.1 I 0.682
GSMUA_Achr11G07180_001 Musa acuminata GSMUA_Achr11G07180_001 I 0.681
Bo6g118350 Brassica oleracea Bo6g118350 I 0.678
Bra015939 Brassica rapa Bra015939 I 0.678
ATMYB122 Arabidopsis lyrata fgenesh2_kg.2__1680__AT1G74080.1 I 0.672
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.671
Lus10028435.g Linum usitatissimum Lus10028435.g I 0.671
Lus10041888.g Linum usitatissimum Lus10041888.g I 0.671
PK27708.1 Cannabis sativa PK27708.1 I 0.668
MYB122 Arabidopsis thaliana AT1G74080 I 0.667
Lus10019085.g Linum usitatissimum Lus10019085.g I 0.665
AMTR_s00024p00250970 Amborella trichopoda AMTR_s00024p00250970 I 0.664