Bo3g026690 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo3g026690 T267232_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB101
M07051_2.00
Arabidopsis thaliana
NWHHNWAACCGWWHH

DDWWCGGTTWNDDWN
Dap-seq
OMalley et al.(2016)
MYB101_col_a
0.909 0.957
MYB101
M07052_2.00
Arabidopsis thaliana
DHHHVTAACYGWHWN

NWDWCRGTTABDDDH
Dap-seq
OMalley et al.(2016)
MYB101_colamp_a
0.909 0.957
Q9FR42_TOBAC
M11076_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBAS1_01
0.815 0.828
myb.Ph3
M02704_2.00
Petunia x hybrida
WAACNGTYW

WRACNGTTW
SELEX
Mathelier et al.(2014)
MA0054.1
0.814 0.839
myb.Ph3
M11070_2.00
Petunia x hybrida
RTAACSGTTTYHW

WDRAAACSGTTAY
Transfac
Matys et al.(2006)
P$MYBPH3_01
0.814 0.839
myb.Ph3
M11071_2.00
Petunia x hybrida
STAACTAACTHHH

DDDAGTTAGTTAS
Transfac
Matys et al.(2006)
P$MYBPH3_02
0.814 0.839
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC

GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.806 0.817
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM

KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.806 0.817
GAM1_ORYSI
M11055_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.789 0.806
MYB33
M02306_2.00
Arabidopsis thaliana
HAACNRHHNN

NNDDYNGTTD
PBM
Weirauch et al.(2014)
pTH8204
0.741 0.774
MYB33
M07120_2.00
Arabidopsis thaliana
NTAACYGWHWH

DWDWCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB33_col_a
0.741 0.774
ATMYB65
M01076_2.00
Arabidopsis thaliana
HAACNRHHN

NDDYNGTTD
PBM
Sullivan et al.(2014)
pTH7084
0.727 0.774
ATMYB65
M07076_2.00
Arabidopsis thaliana
DHHNTAACBGHMW

WKDCVGTTANDDH
Dap-seq
OMalley et al.(2016)
MYB65_col200_a
0.727 0.774
ATMYB65
M07077_2.00
Arabidopsis thaliana
NTAACYGHMWHNDHN

NDHNDWKDCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB65_colamp_a
0.727 0.774
AtMYB81
M07049_2.00
Arabidopsis thaliana
VTAACNGHWWH

DWWDCNGTTAB
Dap-seq
OMalley et al.(2016)
MYB81_col_a
0.674 0.753
AtMYB81
M07050_2.00
Arabidopsis thaliana
DHHNYAACBGHWWH

DWWDCVGTTRNDDH
Dap-seq
OMalley et al.(2016)
MYB81_colamp_a
0.674 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g026690.1 Myb 19 66
Bo3g026690.1 Myb 72 117

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG017984.1 Alligator sinensis Alligator_sinensis_CCG017984.1 N 0.000
Cmyd_10003703 Chelonia mydas Cmyd_10003703 N 0.000
ENSAMEG00000008616 Ailuropoda melanoleuca ENSAMEG00000008616 N 0.000
ENSCSAG00000012875 Chlorocebus sabaeus ENSCSAG00000012875 N 0.000
ENSMMUG00000020483 Macaca mulatta ENSMMUG00000020483 N 0.000
ENSMPUG00000003655 Mustela putorius furo ENSMPUG00000003655 N 0.000
ENSNLEG00000000071 Nomascus leucogenys ENSNLEG00000000071 N 0.000
ENSP00000382084 Macaca fascicularis ENSP00000382084 N 0.000
ENSP00000382084-D1 Bos grunniens ENSP00000382084-D1 N 0.000
ENSPANG00000018658 Papio anubis ENSPANG00000018658 N 0.000
ENSSHAG00000000075 Sarcophilus harrisii ENSSHAG00000000075 N 0.000
ENSSSCG00000010098 Sus scrofa ENSSSCG00000010098 N 0.000
Myotis_brandtii_THAP7_10021815 Myotis brandtii Myotis_brandtii_THAP7_10021815 N 0.000
Ogr01912 Ophisaurus gracilis Ogr01912 N 0.000
THAP7 Loxodonta africana ENSLAFG00000008131 N 0.000
THAP7 Sorex araneus ENSSARG00000005093 N 0.000
THAP7 Erinaceus europaeus ENSEEUG00000011695 N 0.000
THAP7 Equus caballus ENSECAG00000021648 N 0.000
THAP7 Tursiops truncatus ENSTTRG00000009187 N 0.000
Thap7 Dipodomys ordii ENSDORG00000008098 N 0.000
THAP7 Dasypus novemcinctus ENSDNOG00000019491 N 0.000
THAP7 Cavia porcellus ENSCPOG00000003147 N 0.000
THAP7 Callithrix jacchus ENSCJAG00000015921 N 0.000
THAP7 Canis familiaris ENSCAFG00000030978 N 0.000
Thap7 Rattus norvegicus ENSRNOG00000037967 N 0.000
THAP7 Pan troglodytes ENSPTRG00000014098 N 0.000
THAP7 Procavia capensis ENSPCAG00000015860 N 0.000
THAP7 Microcebus murinus ENSMICG00000014619 N 0.000
THAP7 Myotis lucifugus ENSMLUG00000026496 N 0.000
THAP7 Gorilla gorilla ENSGGOG00000025383 N 0.000
THAP7 Homo sapiens ENSG00000184436 N 0.000
Thap7 Mus musculus ENSMUSG00000022760 N 0.000
THAP7 Felis catus ENSFCAG00000025571 N 0.000
THAP7 Oryctolagus cuniculus ENSOCUG00000016516 N 0.000
THAP7 Otolemur garnettii ENSOGAG00000033917 N 0.000
THAP7 Echinops telfairi ENSETEG00000006083 N 0.000
THAP7 Anolis carolinensis ENSACAG00000011895 N 0.000