Bo3g107740 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo3g107740 T267276_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB99
M07151_2.00
Arabidopsis thaliana
NYYYACCWAMYHH

DDRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB99_col_a
0.770 0.903
MYB99
M07152_2.00
Arabidopsis thaliana
YHYACCTAMYH

DRKTAGGTRDR
Dap-seq
OMalley et al.(2016)
MYB99_colamp_a
0.770 0.903
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY

RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.752 0.785
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH

DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.736 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g107740.1 Myb 15 65
Bo3g107740.1 Myb 71 116

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AARA005525 Anopheles arabiensis AARA005525 I 0.000
AATE016567 Anopheles atroparvus AATE016567 I 0.000
ACHR008909 Anopheles christyi ACHR008909 I 0.000
ACOM023078 Anopheles coluzzii ACOM023078 I 0.000
ACUA022787 Anopheles culicifacies ACUA022787 I 0.000
AEPI002124 Anopheles epiroticus AEPI002124 I 0.000
AFUN001809 Anopheles funestus AFUN001809 I 0.000
AGAP011096 Anopheles gambiae AGAP011096 I 0.000
AMAM003092 Anopheles maculatus AMAM003092 I 0.000
AMEC014175 Anopheles melas AMEC014175 I 0.000
AMEM011145 Anopheles merus AMEM011145 I 0.000
AMIN008497 Anopheles minimus AMIN008497 I 0.000
AQUA005181 Anopheles quadriannulatus AQUA005181 I 0.000
ASIS014644 Anopheles sinensis ASIS014644 I 0.000
GA18129 Drosophila pseudoobscura FBgn0078137 I 0.000
GD24965 Drosophila simulans FBgn0196278 I 0.000
GE11469 Drosophila yakuba FBgn0229274 I 0.000
GF13466 Drosophila ananassae FBgn0090495 I 0.000
GG19941 Drosophila erecta FBgn0112141 I 0.000
GI18345 Drosophila mojavensis FBgn0141084 I 0.000
GL20490 Drosophila persimilis FBgn0158085 I 0.000
GM11843 Drosophila sechellia FBgn0166784 I 0.000
LLOJ006051 Lutzomyia longipalpis LLOJ006051 I 0.000
MDOA000553 Musca domestica MDOA000553 I 0.000
NV14868 Nasonia vitripennis NV14868 I 0.000
PPAI007786 Phlebotomus papatasi PPAI007786 I 0.000
slbo Drosophila melanogaster FBgn0005638 D 0.000