Bo3g178250 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo3g178250 T267293_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TRB1
M01070_2.00
Arabidopsis thaliana
WRMCCTAR

YTAGGKYW
PBM
Sullivan et al.(2014)
pTH7117
0.684 0.804
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g178250.1 Myb 5 56

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TRB1 Arabidopsis thaliana AT1G49950 D 0.684
AMTR_s00007p00193000 Amborella trichopoda AMTR_s00007p00193000 I 0.672
Carubv10009836m.g Capsella rubella Carubv10009836m.g I 0.684
Cagra.2826s0004 Capsella grandiflora Cagra.2826s0004 I 0.684
Bostr.26675s0174 Boechera stricta Bostr.26675s0174 I 0.684
mgf009594m Mimulus guttatus mgf009594m I 0.666
OSTLU_27049 Ostreococcus lucimarinus OSTLU_27049 I 0.664
TRB1 Arabidopsis lyrata fgenesh2_kg.1__4077__AT1G49950.2 I 0.684
Bra039650 Brassica rapa Bra039650 I 0.729
Bra018818 Brassica rapa Bra018818 I 0.684
Bra014227 Brassica rapa Bra014227 I 0.875
Bo6g018740 Brassica oleracea Bo6g018740 I 0.684
Bo5g077530 Brassica oleracea Bo5g077530 I 0.729
Thhalv10011686m.g Eutrema salsugineum Thhalv10011686m.g I 0.684